RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	EMC1	Q8N766	993 aa		15.51	■□□□□ 0.07
PHGDH-231	ENST00000641939	IGSF8	Q969P0	613 aa		15.51	■□□□□ 0.07
PHGDH-231	ENST00000641939	SIPA1	Q96FS4	1042 aa		15.51	■□□□□ 0.07
PHGDH-231	ENST00000641939	ANLN	Q9NQW6	1124 aa		15.51	■□□□□ 0.07
PHGDH-231	ENST00000641939	VPS45	Q9NRW7	570 aa		15.51	■□□□□ 0.07
PHGDH-231	ENST00000641939	SUN2	Q9UH99	717 aa		15.51	■□□□□ 0.07
PHGDH-231	ENST00000641939	SPTBN2	O15020	2390 aa		15.51	■□□□□ 0.07
PHGDH-231	ENST00000641939		I6L893	689 aa	Predicted RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	AP5Z1	O43299	807 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	ENDOD1	O94919	500 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	PDGFRA	P16234	1089 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	SDHB	P21912	280 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	SDC4	P31431	198 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	ATXN1	P54253	815 aa	Known RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	OXCT1	P55809	520 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	GSC	P56915	257 aa	Predicted RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	RPL6	Q02878	288 aa	Known RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	C1QBP	Q07021	282 aa	Known RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	RSPO4	Q2I0M5	234 aa	Predicted RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	PLEKHG6	Q3KR16	790 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	C5orf22	Q49AR2	442 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	ACBD5	Q5T8D3	534 aa	Predicted RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	MON1B	Q7L1V2	547 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	CYP2U1	Q7Z449	544 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	C14orf80	Q86SX3	495 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	ZNF366	Q8N895	744 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	OR2T3	Q8NH03	318 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	RXFP2	Q8WXD0	754 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	PRCC	Q92733	491 aa	Predicted RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	RMDN1	Q96DB5	314 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	C1orf74	Q96LT6	269 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	EDEM3	Q9BZQ6	932 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	SMOC1	Q9H4F8	434 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	FBRS	Q9HAH7	460 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	CD93	Q9NPY3	652 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	USP36	Q9P275	1121 aa	Known RBP	15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	CACNA1E	Q15878	2313 aa		15.5	■□□□□ 0.07
PHGDH-231	ENST00000641939	C2CD4B	A6NLJ0	364 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	CLDN11	O75508	207 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	GJB6	O95452	261 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	SRPRA	P08240	638 aa	Known RBP	15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	ACADM	P11310	421 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	KRT3	P12035	628 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	TNFAIP3	P21580	790 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	PTGER3	P43115	390 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	PTPN9	P43378	593 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	IRAK1	P51617	712 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	PLK1	P53350	603 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	UBASH3A	P57075	661 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	ATP11A	P98196	1134 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	ECT2L	Q008S8	904 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	SF3A2	Q15428	464 aa	Known RBP	15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	ASIC2	Q16515	512 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	CCDC14	Q49A88	953 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	SFMBT2	Q5VUG0	894 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	CXorf57	Q6NSI4	855 aa	Known RBP	15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	LRRC31	Q6UY01	552 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	APCDD1	Q8J025	514 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	C12orf50	Q8NA57	414 aa	Predicted RBP	15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	KDM1B	Q8NB78	822 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	C3orf20	Q8ND61	904 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	JOSD2	Q8TAC2	188 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	MYO19	Q96H55	970 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	MRGPRX3	Q96LB0	322 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	HAPLN3	Q96S86	360 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	SELENOO	Q9BVL4	669 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	TTYH3	Q9C0H2	523 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	ITM2C	Q9NQX7	267 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	AIPL1	Q9NZN9	384 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	ERVW-1	Q9UQF0	538 aa		15.49	■□□□□ 0.07
PHGDH-231	ENST00000641939	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	SIGLEC16	A6NMB1	481 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	NDUFS2	O75306	463 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	MZF1	P28698	734 aa	Predicted RBP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	CD6	P30203	668 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	DPP6	P42658	865 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	CTSO	P43234	321 aa	Predicted RBP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	TPMT	P51580	245 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	CDH4	P55283	916 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	SULT2A1	Q06520	285 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	ZNF177	Q13360	481 aa	Predicted RBP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	PUM1	Q14671	1186 aa	Known RBP eCLIP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	ARID5B	Q14865	1188 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	CDO1	Q16878	200 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	C15orf59	Q2T9L4	293 aa	Predicted RBP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	AASDH	Q4L235	1098 aa	Predicted RBP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	FIGN	Q5HY92	759 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	RNF219	Q5W0B1	726 aa	Predicted RBP	15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	LYSMD4	Q5XG99	296 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	ACAD10	Q6JQN1	1059 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	PPP1R2P3	Q6NXS1	205 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	ARMCX6	Q7L4S7	300 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	FAM131B	Q86XD5	332 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	ZNF683	Q8IZ20	524 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	NETO1	Q8TDF5	533 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	PIGK	Q92643	395 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	PPP1R9B	Q96SB3	815 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	SYT11	Q9BT88	431 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	PRSS16	Q9NQE7	514 aa		15.48	■□□□□ 0.07
PHGDH-231	ENST00000641939	TMPRSS4	Q9NRS4	437 aa		15.48	■□□□□ 0.07

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