RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 CCSAPQ6IQ19 270 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 ZNF449Q6P9G9 518 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 CES3Q6UWW8 571 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 NUDCD3Q8IVD9 361 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 DQX1Q8TE96 717 aaKnown RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 INPP5DQ92835 1189 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 UTP4Q969X6 686 aaKnown RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 SLC7A6OSQ96CW6 309 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 HEY2Q9UBP5 337 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 MTO1Q9Y2Z2 717 aaKnown RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 A8MUI8 341 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 MTSS1O43312 755 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 USP12O75317 370 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 ALDOAP04075 364 aaKnown RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 MX2P20592 715 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 SERPINB6P35237 376 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 TMPRSS15P98073 1019 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 PRKCZQ05513 592 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 ZBTB17Q13105 803 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 CHI3L2Q15782 390 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 SPANXN3Q5MJ09 141 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 ATG16L1Q676U5 607 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 KCTD11Q693B1 232 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 OVOS1Q6IE37 1185 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 DCLRE1AQ6PJP8 1040 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 SCAMP5Q8TAC9 235 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 RNF34Q969K3 372 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 C7orf26Q96N11 449 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 FCRL3Q96P31 734 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 RAB3IPQ96QF0 476 aaPredicted RBP17.49■□□□□ 0.39
PHGDH-211ENST00000641213 GBA3Q9H227 469 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 SAR1AQ9NR31 198 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 IL1RAPL1Q9NZN1 696 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 RPS6KL1Q9Y6S9 549 aa17.49■□□□□ 0.39
PHGDH-211ENST00000641213 FNDC1Q4ZHG4 1894 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-211ENST00000641213 F8W810 466 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 BIRC5O15392 142 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 BPGMP07738 259 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 ERVK-10P10266 1014 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 YY1P25490 414 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 TEX44Q53QW1 395 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 RASSF3Q86WH2 238 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 ACMSDQ8TDX5 336 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 UROC1Q96N76 676 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 PGLYRP2Q96PD5 576 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 MLPHQ9BV36 600 aaPredicted RBP17.48■□□□□ 0.39
PHGDH-211ENST00000641213 TRHDEQ9UKU6 1024 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 NYNRINQ9P2P1 1898 aaKnown RBP17.48■□□□□ 0.39
PHGDH-211ENST00000641213 CCDC195A0A1B0GUA6 201 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 TPP1O14773 563 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 IGLV3-25P01717 112 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 SLC8A1P32418 973 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 SMAD1Q15797 465 aaKnown RBP17.48■□□□□ 0.39
PHGDH-211ENST00000641213 STXBP5Q5T5C0 1151 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 THEM5Q8N1Q8 247 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 RAB3IL1Q8TBN0 382 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 SKA1Q96BD8 255 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 CERS2Q96G23 380 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 SUSD3Q96L08 255 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 CASS4Q9NQ75 786 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 TRMT13Q9NUP7 481 aaKnown RBP17.48■□□□□ 0.39
PHGDH-211ENST00000641213 ZFATQ9P243 1243 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 VANGL2Q9ULK5 521 aa17.48■□□□□ 0.39
PHGDH-211ENST00000641213 FAM237BA0A1B0GVD1 139 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 ERI2A8K979 691 aaKnown RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 TRAFD1O14545 582 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 DNAJC6O75061 913 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 ITGA2BP08514 1039 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 MYL2P10916 166 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 NFKB1P19838 968 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 PAX3P23760 479 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 SERPINB3P29508 390 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 RASSF2P50749 326 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 OCRLQ01968 901 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 EIF4EBP2Q13542 120 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 PDE1CQ14123 709 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 MAPRE1Q15691 268 aaKnown RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 TRIM71Q2Q1W2 868 aaKnown RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 ITPRIPL1Q6GPH6 555 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 KYAT3Q6YP21 454 aaKnown RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 BEND5Q7L4P6 421 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 ZNF598Q86UK7 904 aaKnown RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 ZSCAN18Q8TBC5 510 aaPredicted RBP17.47■□□□□ 0.39
PHGDH-211ENST00000641213 DPF3Q92784 378 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 VAT1Q99536 393 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 OSBPL2Q9H1P3 480 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
PHGDH-211ENST00000641213 MYLKQ15746 1914 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 C2orf71A6NGG8 1288 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 SKIP12755 728 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 TSPY1Q01534 308 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 FAM26DQ5JW98 314 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 CELF6Q96J87 481 aaKnown RBP17.46■□□□□ 0.39
PHGDH-211ENST00000641213 TRIM62Q9BVG3 475 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 ZNF395Q9H8N7 513 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-211ENST00000641213 FBXO6Q9NRD1 293 aaPredicted RBP17.46■□□□□ 0.39
PHGDH-211ENST00000641213 ARHGEF38Q9NXL2 777 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 BFARQ9NZS9 450 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 LNPEPQ9UIQ6 1025 aa17.46■□□□□ 0.39
PHGDH-211ENST00000641213 EMCNQ9ULC0 261 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms