RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 RTP3Q9BQQ7 232 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CCDC106Q9BWC9 280 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 DDIT4Q9NX09 232 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 FBXW11Q9UKB1 542 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 DNAJC16Q9Y2G8 782 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CDY2AQ9Y6F7 541 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 SF3B1O75533 1304 aaKnown RBP eCLIP9.59□□□□□ -0.877e-6■■■□□ 17.2
NECAP1-225ENST00000640209 PRR5-ARHGAP8B1AHC4 643 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 B2RBV5 119 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CAPN9O14815 690 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 PPP1R12AO14974 1030 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 HNRNPCL1O60812 293 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 STK10O94804 968 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CELF2O95319 508 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 PROCP04070 461 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 TPH1P17752 444 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 HOXC8P31273 242 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 PTDSS1P48651 473 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 ERFP50548 548 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 SLC8A3P57103 927 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 TPI1P60174 286 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 ARHGAP8P85298 464 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 PURAQ00577 322 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 KDSRQ06136 332 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 RCN2Q14257 317 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 DLG2Q15700 870 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 PAN2Q504Q3 1202 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 TEX9Q8N6V9 391 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 RBM15BQ8NDT2 890 aaKnown RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 NRG4Q8WWG1 115 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 MFSD3Q96ES6 412 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 CERS2Q96G23 380 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 SORT1Q99523 831 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 OXCT2Q9BYC2 517 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-225ENST00000640209 PNPOQ9NVS9 261 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 UBP1Q9NZI7 540 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 ST3GAL5Q9UNP4 418 aa9.59□□□□□ -0.87
NECAP1-225ENST00000640209 ZCWPW2A0A1B0GU75 182 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 CCDC78A2IDD5 438 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 TPD52L2O43399 206 aaKnown RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 CNTFP26441 200 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SCNN1GP51170 649 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 PDE1BQ01064 536 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 IRF5Q13568 498 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 TAF11Q15544 211 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 FSCN1Q16658 493 aaKnown RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 TIGD5Q53EQ6 642 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 RAB41Q5JT25 222 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 KCTD11Q693B1 232 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 KYAT3Q6YP21 454 aaKnown RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 DCLK2Q8N568 766 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 ZNF669Q96BR6 464 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 MOCOSQ96EN8 888 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 RSRC1Q96IZ7 334 aaKnown RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 CELF6Q96J87 481 aaKnown RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 TUBB6Q9BUF5 446 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 CAB39LQ9H9S4 337 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 ACSS2Q9NR19 701 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 FAM105AQ9NUU6 356 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 THAP1Q9NVV9 213 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 ZFATQ9P243 1243 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 PLA2G4CQ9UP65 541 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SHROOM3Q8TF72 1996 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SCN4AP35499 1836 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 IQCA1LA6NCM1 817 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 MEI4A8MW99 385 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 GOLGA8TH3BQL2 631 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 GLRA3O75311 464 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 AP2A1O95782 977 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 CHRNA1P02708 482 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SLC1A6P48664 564 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 PGFP49763 221 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 CPT1AP50416 773 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SESN3P58005 492 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 IRF9Q00978 393 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 PPIDQ08752 370 aaKnown RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SCAPQ12770 1279 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 NAA25Q14CX7 972 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 RCN1Q15293 331 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 VWA5B1Q5TIE3 1220 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 AGMOQ6ZNB7 445 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 ARHGAP36Q6ZRI8 547 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SPNS2Q8IVW8 549 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 TNS4Q8IZW8 715 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 SMC1BQ8NDV3 1235 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 TRPV1Q8NER1 839 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 PPP1R14CQ8TAE6 165 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 ZSCAN18Q8TBC5 510 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 DTX3LQ8TDB6 740 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 ACMSDQ8TDX5 336 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 CDKL2Q92772 493 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 NTAN1Q96AB6 310 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 ZNF419Q96HQ0 510 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-225ENST00000640209 RILPQ96NA2 401 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 TMEM209Q96SK2 561 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 FAM167BQ9BTA0 163 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 COLEC11Q9BWP8 271 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 WWP1Q9H0M0 922 aa9.58□□□□□ -0.88
NECAP1-225ENST00000640209 AP5M1Q9H0R1 490 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms