RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 CCDC88AQ3V6T2 1871 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 TRIM60Q495X7 471 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 PRR16Q569H4 304 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 TEX30Q5JUR7 227 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 TRAF7Q6Q0C0 670 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 ETNPPLQ8TBG4 499 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 STAMQ92783 540 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 MTBPQ96DY7 904 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 CCDC51Q96ER9 411 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 SHDQ96IW2 340 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 SEC16BQ96JE7 1060 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 ASPSCR1Q9BZE9 553 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.4□□□□□ -1.71
SCN3A-209ENST00000639244 ASH2LQ9UBL3 628 aa4.4□□□□□ -1.71
SCN3A-209ENST00000639244 CFAP99D6REC4 459 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PITPNM1O00562 1244 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SYN3O14994 580 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SMAD9O15198 467 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FCER2P06734 321 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PF4V1P10720 104 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 COL6A2P12110 1019 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CPB1P15086 417 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CD40LGP29965 261 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NPY2RP49146 381 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DRG2P55039 364 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FOXO1Q12778 655 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ANO6Q4KMQ2 910 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 METTL4Q8N3J2 472 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ANKRD44Q8N8A2 993 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DTX3Q8N9I9 347 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZSCAN1Q8NBB4 408 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NGLY1Q96IV0 654 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 TCEAL7Q9BRU2 100 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 METTL8Q9H825 291 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ASNSD1Q9NWL6 643 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ADAM22Q9P0K1 906 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RUVBL2Q9Y230 463 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DLGAP4Q9Y2H0 992 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CYP46A1Q9Y6A2 500 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FAM135AQ9P2D6 1515 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ADCY6O43306 1168 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PROM1O43490 865 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ULK1O75385 1050 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FABP1P07148 127 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SSTR3P32745 418 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MTHFSP49914 203 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ERFP50548 548 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZIK1Q3SY52 487 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SLX4IPQ5VYV7 408 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PRR18Q8N4B5 295 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SLC2A13Q96QE2 648 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PCDHB16Q9NRJ7 776 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 INTS13Q9NVM9 706 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 LIMA1Q9UHB6 759 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 GLS2Q9UI32 602 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SLC22A14Q9Y267 594 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MEI4A8MW99 385 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 UBTFL1P0CB47 393 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MCM7P33993 719 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 GJC1P36383 396 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NNTQ13423 1086 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ATP1A4Q13733 1029 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 KCNJ8Q15842 424 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SULT1C3Q6IMI6 304 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZSWIM9Q86XI8 627 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CYP4Z2PQ8N1L4 340 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 GSTCDQ8NEC7 633 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 METTL21AQ8WXB1 218 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RILPQ96NA2 401 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 BIRC8Q96P09 236 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RIBC2Q9H4K1 309 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NPHS2Q9NP85 383 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CHRAC1Q9NRG0 131 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 TJP2Q9UDY2 1190 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ENOPH1Q9UHY7 261 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CNOT11Q9UKZ1 510 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CDH9Q9ULB4 789 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 NOD1Q9Y239 953 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 SCN9AQ15858 1988 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 A0A1W2PPW3 197 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PSAPP07602 524 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ARCN1P48444 511 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RACK1P63244 317 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MRPS9P82933 396 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 BNC1Q01954 994 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 DDX39BQ13838 428 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RRP1BQ14684 758 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 KLHL36Q8N4N3 616 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 KDF1Q8NAX2 398 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZIM3Q96PE6 472 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 KCNJ15Q99712 375 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FAM118BQ9BPY3 351 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MND1Q9BWT6 205 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 JMJD4Q9H9V9 463 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 FBXO28Q9NVF7 368 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 RRP8O43159 456 aaKnown RBP4.39□□□□□ -1.71
SCN3A-209ENST00000639244 MFN2O95140 757 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 CD63P08962 238 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 ZCCHC18P0CG32 403 aa4.39□□□□□ -1.71
SCN3A-209ENST00000639244 PKMP14618 531 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms