RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 BANF1O75531 89 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ZNF57Q68EA5 555 aaPredicted RBP18.84■□□□□ 0.61
SCARB2-213ENST00000638680 NPNTQ6UXI9 565 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 TFAP2DQ7Z6R9 452 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ATXN3LQ9H3M9 355 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ZMYM5Q9UJ78 669 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 DOLKQ9UPQ8 538 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 A0A0B4J269 797 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 CCL15-CCL14A0A0B4J2E2 113 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 GPR182O15218 404 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 USP12O75317 370 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 MAGEA10P43363 369 aaPredicted RBP18.84■□□□□ 0.61
SCARB2-213ENST00000638680 CCL15Q16663 113 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 CASP12Q6UXS9 341 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 KAT5Q92993 513 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 PPRC1Q5VV67 1664 aaKnown RBP18.84■□□□□ 0.61
SCARB2-213ENST00000638680 EML1O00423 815 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 PGM3O95394 542 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ABCG1P45844 678 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ST13P50502 369 aaKnown RBP18.84■□□□□ 0.61
SCARB2-213ENST00000638680 PIWIL2Q8TC59 973 aaKnown RBP18.84■□□□□ 0.61
SCARB2-213ENST00000638680 COLEC11Q9BWP8 271 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 MIEF1Q9NQG6 463 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 A0A087X1B8 175 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 ARMC6Q6NXE6 501 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 EPHX4Q8IUS5 362 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 METTL6Q8TCB7 284 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 C1orf50Q9BV19 199 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 TRIM8Q9BZR9 551 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 SYNDIG1Q9H7V2 258 aa18.84■□□□□ 0.61
SCARB2-213ENST00000638680 CYP1A2P05177 515 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 THP07101 528 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 PIK3R1P27986 724 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 IL12RB1P42701 662 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 NEK3P51956 506 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 GRIK3Q13003 919 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 ZNF618Q5T7W0 954 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 ANKS6Q68DC2 871 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 WDR36Q8NI36 951 aaKnown RBP18.83■□□□□ 0.61
SCARB2-213ENST00000638680 ADAM32Q8TC27 787 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 EPS8L1Q8TE68 723 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 PACSIN3Q9UKS6 424 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 TK2O00142 265 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 LIASO43766 372 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 ACAT1P24752 427 aaKnown RBP18.83■□□□□ 0.61
SCARB2-213ENST00000638680 SLC6A3Q01959 620 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 UBAP2LQ14157 1087 aaKnown RBP18.83■□□□□ 0.61
SCARB2-213ENST00000638680 SPANXN2Q5MJ10 180 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 POLNQ7Z5Q5 900 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 PGBD3Q8N328 593 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 ENKURQ8TC29 256 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 HMG20AQ9NP66 347 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 TRPC4Q9UBN4 977 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 SLC25A13Q9UJS0 675 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 PCDHA11Q9Y5I1 949 aa18.83■□□□□ 0.61
SCARB2-213ENST00000638680 RAD51BO15315 384 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 CHADO15335 359 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 COX4I1P13073 169 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 BACE1P56817 501 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 KLHL17Q6TDP4 642 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 DHDDSQ86SQ9 333 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 ZNF276Q8N554 614 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 TSPAN14Q8NG11 270 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 TIMM13Q9Y5L4 95 aaPredicted RBP18.83■□□□□ 0.6
SCARB2-213ENST00000638680 MAGEE2Q8TD90 523 aaPredicted RBP18.83■□□□□ 0.6
SCARB2-213ENST00000638680 ACP6Q9NPH0 428 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 ANAPC2Q9UJX6 822 aa18.83■□□□□ 0.6
SCARB2-213ENST00000638680 PSMD12O00232 456 aaPredicted RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 LRG1P02750 347 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 EIF4BP23588 611 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 CASP5P51878 434 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 YWHAZP63104 245 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MAMLD1Q13495 774 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 PDK4Q16654 411 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 SCARA3Q6AZY7 606 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MILR1Q7Z6M3 343 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 TTC7BQ86TV6 843 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 DPP10Q8N608 796 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MED8Q96G25 268 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 TBCDQ9BTW9 1192 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 TAS2R13Q9NYV9 303 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 NCANO14594 1321 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 ERCC6L2Q5T890 1561 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 H7C4K7 107 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MSH3P20585 1137 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 DSG3P32926 999 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 SHMT1P34896 483 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 SERPINH1P50454 418 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 ACAP1Q15027 740 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 TSNQ15631 228 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 KHDRBS2Q5VWX1 349 aaKnown RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 C8orf59Q8N0T1 100 aaPredicted RBP18.82■□□□□ 0.6
SCARB2-213ENST00000638680 DEFB106AQ8N104 65 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 AGBL3Q8NEM8 1001 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 ACTRT2Q8TDY3 377 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 MBOAT7Q96N66 472 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 ATP6V1HQ9UI12 483 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 DSEQ9UL01 958 aa18.82■□□□□ 0.6
SCARB2-213ENST00000638680 SORCS3Q9UPU3 1222 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms