RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TJP2Q9UDY2 1190 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 SLCO3A1Q9UIG8 710 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 RWDD2AQ9UIY3 292 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 FAM208BQ5VWN6 2430 aa19.1■□□□□ 0.65
CLN6-220ENST00000637450 BECN2A8MW95 431 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 FLRT2O43155 660 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 IGHV4-34P06331 123 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 SLC9A1P19634 815 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 PITX1P78337 314 aaPredicted RBP19.09■□□□□ 0.65
CLN6-220ENST00000637450 SFSWAPQ12872 951 aaKnown RBP19.09■□□□□ 0.65
CLN6-220ENST00000637450 PDCLQ13371 301 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 TAF5Q15542 800 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 CST6Q15828 149 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 KIAA0895LQ68EN5 471 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 APCDD1Q8J025 514 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 WDTC1Q8N5D0 677 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 RHBDD1Q8TEB9 315 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 FAM129BQ96TA1 746 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 CDC6Q99741 560 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.09■□□□□ 0.65
CLN6-220ENST00000637450 KIAA1468Q9P260 1216 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 SERGEFQ9UGK8 458 aa19.09■□□□□ 0.65
CLN6-220ENST00000637450 CABIN1Q9Y6J0 2220 aa19.08■□□□□ 0.65
CLN6-220ENST00000637450 ITIH6Q6UXX5 1313 aa19.08■□□□□ 0.65
CLN6-220ENST00000637450 PKD1L2Q7Z442 2459 aa19.08■□□□□ 0.65
CLN6-220ENST00000637450 EDDM13A0A1B0GTR0 161 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 KCNU1A8MYU2 1149 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 MID1O15344 667 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 GALCP54803 685 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 KCNT1Q5JUK3 1230 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 CCNI2Q6ZMN8 369 aaPredicted RBP19.08■□□□□ 0.64
CLN6-220ENST00000637450 CHSY1Q86X52 802 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 MMAAQ8IVH4 418 aaKnown RBP19.08■□□□□ 0.64
CLN6-220ENST00000637450 ATP6V0D2Q8N8Y2 350 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 IGSF8Q969P0 613 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 PRMT1Q99873 361 aaKnown RBP19.08■□□□□ 0.64
CLN6-220ENST00000637450 NEUROG2Q9H2A3 272 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 TOR4AQ9NXH8 423 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 ADAMTS1Q9UHI8 967 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 SLC12A6Q9UHW9 1150 aa19.08■□□□□ 0.64
CLN6-220ENST00000637450 A0A1W2PP55 124 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 A0A1W2PPC4 97 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 F5H5T6 163 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 TAF4O00268 1085 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 KCNK3O14649 394 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 DKK1O94907 266 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 GLI1P08151 1106 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 SLC8A1P32418 973 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 USP8P40818 1118 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 CTSKP43235 329 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 RACK1P63244 317 aaKnown RBP19.07■□□□□ 0.64
CLN6-220ENST00000637450 CDK17Q00537 523 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 APBA1Q02410 837 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 SLC12A1Q13621 1099 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 ARHGAP44Q17R89 818 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 NCEH1Q6PIU2 408 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 LAYNQ6UX15 382 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 GBP6Q6ZN66 633 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 CREBRFQ8IUR6 639 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 SHC3Q92529 594 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 PTPRN2Q92932 1015 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 RPL10LQ96L21 214 aaKnown RBP19.07■□□□□ 0.64
CLN6-220ENST00000637450 SLC2A13Q96QE2 648 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 CPXM1Q96SM3 734 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 OMDQ99983 421 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 ASNSD1Q9NWL6 643 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 APEX2Q9UBZ4 518 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 FZD4Q9ULV1 537 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 BTBD3Q9Y2F9 522 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 CEP83Q9Y592 693 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 DSPP15924 2871 aaKnown RBP19.07■□□□□ 0.64
CLN6-220ENST00000637450 ZFYVE26Q68DK2 2539 aa19.07■□□□□ 0.64
CLN6-220ENST00000637450 FAM47DPA6NHR8 397 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 C10orf142B7Z368 130 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 H0Y8X5 98 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 PCDHGA12O60330 932 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 RNASEH2AO75792 299 aaKnown RBP19.06■□□□□ 0.64
CLN6-220ENST00000637450 ATXN1LP0C7T5 689 aaKnown RBP19.06■□□□□ 0.64
CLN6-220ENST00000637450 SLC2A3P11169 496 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 PLK1P53350 603 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 EFHC1Q5JVL4 640 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 RNF219Q5W0B1 726 aaPredicted RBP19.06■□□□□ 0.64
CLN6-220ENST00000637450 SMYD5Q6GMV2 418 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 IRF2BP1Q8IU81 584 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 DEFB106AQ8N104 65 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 CCAR2Q8N163 923 aaKnown RBP19.06■□□□□ 0.64
CLN6-220ENST00000637450 OR2T34Q8NGX1 318 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 PPP1R13BQ96KQ4 1090 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 EBF2Q9HAK2 575 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 PCDHGC3Q9UN70 934 aa19.06■□□□□ 0.64
CLN6-220ENST00000637450 GTPBP10A4D1E9 387 aaKnown RBP19.05■□□□□ 0.64
CLN6-220ENST00000637450 LRRC72A6NJI9 287 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 VILLO15195 856 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 ABCB4P21439 1286 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 PON1P27169 355 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 CCR1P32246 355 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 STK19P49842 368 aaPredicted RBP19.05■□□□□ 0.64
CLN6-220ENST00000637450 CCT8P50990 548 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 SULT2A1Q06520 285 aa19.05■□□□□ 0.64
CLN6-220ENST00000637450 SCAPQ12770 1279 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms