RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SSTP61278 116 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 ABATP80404 500 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 PAK1Q13153 545 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TRA2AQ13595 282 aaKnown RBP eCLIP3.13□□□□□ -1.91
VIM-210ENST00000637053 IDI1Q13907 227 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 RCN2Q14257 317 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 PDK1Q15118 436 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 PTPAQ15257 358 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 NTRK3Q16288 839 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 HFEQ30201 348 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 Q3ZCU0 254 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 KCTD21Q4G0X4 260 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 PRAMEF14Q5SWL7 426 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 ERMARDQ5T6L9 678 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 RNASEH2BQ5TBB1 312 aaKnown RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 IGFL4Q6B9Z1 124 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 GTF2IRD2BQ6EKJ0 949 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 OVOS1Q6IE37 1185 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 KLHL24Q6TFL4 600 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 GLB1LQ6UWU2 654 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 BBS12Q6ZW61 710 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 C16orf59Q7L2K0 433 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TAF8Q7Z7C8 310 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TADA2BQ86TJ2 420 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TLK2Q86UE8 772 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 GTF2IRD2Q86UP8 949 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SGMS1Q86VZ5 419 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 ARMC8Q8IUR7 673 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TRIM59Q8IWR1 403 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SCN4BQ8IWT1 228 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 DNAJC10Q8IXB1 793 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 PHC2Q8IXK0 858 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 C12orf56Q8IXR9 622 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 FAM217AQ8IXS0 508 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SPARTQ8N0X7 666 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 LSMEM2Q8N112 164 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 LGI4Q8N135 537 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 ADSSL1Q8N142 457 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 BBS5Q8N3I7 341 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TXLNBQ8N3L3 684 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 IGSF22Q8N9C0 903 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TDRD5Q8NAT2 981 aaKnown RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 SMYD1Q8NB12 490 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 DNERQ8NFT8 737 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 OR6J1Q8NGC5 347 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 OR52M1Q8NGK5 317 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 HUS1BQ8NHY5 278 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 CDC26Q8NHZ8 85 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SMARCC2Q8TAQ2 1214 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 FAM71BQ8TC56 605 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SLC22A8Q8TCC7 542 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 HASPINQ8TF76 798 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TGFBRAP1Q8WUH2 860 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 STYXQ8WUJ0 223 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 AFG1LQ8WV93 481 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 RIN2Q8WYP3 895 aaPredicted RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 IP6K1Q92551 441 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 PRCCQ92733 491 aaPredicted RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 KAT2BQ92831 832 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 INPP5DQ92835 1189 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 HDAC10Q969S8 669 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 EFHD2Q96C19 240 aaPredicted RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 RNF125Q96EQ8 232 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 VCPIP1Q96JH7 1222 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 C7orf34Q96L11 122 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 WWC2-AS2Q96NR7 200 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 TWNKQ96RR1 684 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SMC6Q96SB8 1091 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 DMRTA2Q96SC8 542 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SLC9A7Q96T83 725 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 AGAP2Q99490 1192 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 KCNJ15Q99712 375 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 COQ7Q99807 217 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 FAM118BQ9BPY3 351 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 CCDC77Q9BR77 488 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 LLPHQ9BRT6 129 aaKnown RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 THUMPD2Q9BTF0 503 aaKnown RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 NUP85Q9BW27 656 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 CDK19Q9BWU1 502 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 PINK1Q9BXM7 581 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 LSG1Q9H089 658 aaKnown RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 ADNPQ9H2P0 1102 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 RNPEPQ9H4A4 650 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SYNDIG1Q9H7V2 258 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 MLXIPQ9HAP2 919 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 BRF2Q9HAW0 419 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 KCNK13Q9HB14 408 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 LY9Q9HBG7 655 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 RXFP1Q9HBX9 757 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 CABP5Q9NP86 173 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SAYSD1Q9NPB0 183 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 RRAGDQ9NQL2 400 aaPredicted RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 CHST7Q9NS84 486 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 SOHLH2Q9NX45 425 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 DDX43Q9NXZ2 648 aaKnown RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 H2AFY2Q9P0M6 372 aaPredicted RBP3.13□□□□□ -1.91
VIM-210ENST00000637053 PPP4R1LQ9P1A2 415 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 APEX2Q9UBZ4 518 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 MAD2L2Q9UI95 211 aa3.13□□□□□ -1.91
VIM-210ENST00000637053 APPL1Q9UKG1 709 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms