RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 ART3Q13508 389 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 CEACAM7Q14002 265 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 KRT80Q6KB66 452 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 ZPBP2Q6X784 338 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 TRPM4Q8TD43 1214 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 ZNF597Q96LX8 424 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 TCHPQ9BT92 498 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 GLIS2Q9BZE0 524 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 WDR41Q9HAD4 459 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 VPS45Q9NRW7 570 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 PNPLA3Q9NST1 481 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 NXF1Q9UBU9 619 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 NR2E3Q9Y5X4 410 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 TNFSF9P41273 254 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 PHEXP78562 749 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 TFAMQ00059 246 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 SEMA5AQ13591 1074 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 STILQ15468 1287 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 MGAT5BQ3V5L5 792 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 PPM1JQ5JR12 505 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 SH3PXD2AQ5TCZ1 1133 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 PRAMEF18Q5VWM3 479 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 VSIG10LQ86VR7 867 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 UNC5BQ8IZJ1 945 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 HM13Q8TCT9 377 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 RXFP2Q8WXD0 754 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 SLC4A5Q9BY07 1137 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 ILKAPQ9H0C8 392 aaPredicted RBP15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 PDZD7Q9H5P4 517 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 EFCAB1Q9HAE3 211 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 IGSF9Q9P2J2 1179 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 RNF11Q9Y3C5 154 aa15.92■□□□□ 0.14
CACNA1A-235ENST00000637004 C2CD4BA6NLJ0 364 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 H3BNH8 94 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 MAP3K6O95382 1288 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 ENO3P13929 434 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 KCNA2P16389 499 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 ARL2P36404 184 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 GRIA1P42261 906 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 RFTN1Q14699 578 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 HERC3Q15034 1050 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 GPC2Q8N158 579 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 PCDH19Q8TAB3 1148 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 MAPK15Q8TD08 544 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 RCN3Q96D15 328 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 RMND5BQ96G75 393 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 NAT9Q9BTE0 207 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 XYLT2Q9H1B5 865 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 CAAP1Q9H8G2 361 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 SLC38A10Q9HBR0 1119 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 TDRKHQ9Y2W6 561 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 XPO1O14980 1071 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 VARSP26640 1264 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 MSX2P35548 267 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 PPARGP37231 505 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 HK2P52789 917 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 ACTR2P61160 394 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 ESRRGP62508 458 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 SPIDRQ14159 915 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 C16orf72Q14CZ0 275 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 PPM1LQ5SGD2 360 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 CPSF7Q8N684 471 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 FAM151AQ8WW52 585 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 TMIGD2Q96BF3 282 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 TSPYL2Q9H2G4 693 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 LIN28AQ9H9Z2 209 aaKnown RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 SLC17A6Q9P2U8 582 aa15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 CTDP1Q9Y5B0 961 aaPredicted RBP15.91■□□□□ 0.14
CACNA1A-235ENST00000637004 ADCY6O43306 1168 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 TRIM13O60858 407 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 TADA2AO75478 443 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 RNASEH2AO75792 299 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 NR3C2P08235 984 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 ZFXP17010 805 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 GP5P40197 560 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 CDO1Q16878 200 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 C15orf59Q2T9L4 293 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 SCYL2Q6P3W7 929 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 ABHD15Q6UXT9 468 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 CARM1Q86X55 608 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 RIN3Q8TB24 985 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 USP13Q92995 863 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 TBCBQ99426 244 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 ZNF670Q9BS34 389 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 MORF4L1Q9UBU8 362 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 ARID2Q68CP9 1835 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 ZNF701M0R085 212 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 ACOT8O14734 319 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 WDR46O15213 610 aaKnown RBP15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 HDAC3O15379 428 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 TNNC2P02585 160 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 PGAM1P18669 254 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 PHKA2P46019 1235 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 STT3AP46977 705 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 ENTPD1P49961 510 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 SLC10A2Q12908 348 aaPredicted RBP15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 NRF1Q16656 503 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 MFSD4BQ5TF39 518 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 KLHL32Q96NJ5 620 aa15.9■□□□□ 0.14
CACNA1A-235ENST00000637004 OXCT2Q9BYC2 517 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms