RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 KCNK16Q96T55 309 aa14.38□□□□□ -0.11
CACNA1A-228ENST00000636610 LAMA2P24043 3122 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 KPNA7A9QM74 516 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 SERPINB9P50453 376 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 DNAL1Q4LDG9 190 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 PAN2Q504Q3 1202 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 FBXO47Q5MNV8 452 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 NOL9Q5SY16 702 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 C9orf57Q5W0N0 161 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 FAM156AQ8NDB6 213 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 CERS2Q96G23 380 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 OMDQ99983 421 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 C16orf70Q9BSU1 422 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 MMADHCQ9H3L0 296 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 ATXN3LQ9H3M9 355 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 IARS2Q9NSE4 1012 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 A0A096LPK6 155 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 MYOCOSA0A1B0GUC4 107 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 MEIS3P2A8K0S8 358 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 EEF2KO00418 725 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 LIN7AO14910 233 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 GLRA3O75311 464 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 SERPINE1P05121 402 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 RAG1P15918 1043 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 MPSTP25325 297 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 TBL3Q12788 808 aaKnown RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 ITGA7Q13683 1181 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 ZNF484Q5JVG2 852 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 PTAR1Q7Z6K3 402 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 MYLK4Q86YV6 388 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 ANKRD52Q8NB46 1076 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 TMEM40Q8WWA1 233 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 LRRC39Q96DD0 335 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 SCYL1Q96KG9 808 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 NUF2Q9BZD4 464 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 VRTNQ9H8Y1 702 aa14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 C20orf96Q9NUD7 363 aaPredicted RBP14.37□□□□□ -0.11
CACNA1A-228ENST00000636610 A0A1B0GVG6 124 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 STX16-NPEPL1H3BU86 382 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 NRP1O14786 923 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 ZBTB24O43167 697 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 POLBP06746 335 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 SRGAP2BP0DMP2 458 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 TPSB2P20231 275 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 PAPOLAP51003 745 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 ABCE1P61221 599 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 DLG1Q12959 904 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 TPSAB1Q15661 275 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 RPS27LQ71UM5 84 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 SLC26A9Q7LBE3 791 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 BEST2Q8NFU1 509 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 LENG8Q96PV6 779 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 GCNAQ96QF7 691 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 SIK2Q9H0K1 926 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 LRRC4Q9HBW1 653 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 RGS17Q9UGC6 210 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 A0A0G2JLL6 359 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 I6L893 689 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 DPYSL4O14531 572 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 IREB2P48200 963 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 SLC26A2P50443 739 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 NUDT2P50583 147 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 BCAT1P54687 386 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 DEUP1Q05D60 604 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 NIPAL4Q0D2K0 466 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 CCNIQ14094 377 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 TAPT1Q6NXT6 567 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 KYAT3Q6YP21 454 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 PRRT2Q7Z6L0 340 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 OSTM1Q86WC4 334 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 GDPD5Q8WTR4 605 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 DNAJB3Q8WWF6 145 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 CDH22Q9UJ99 828 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 KIAA1257Q9ULG3 409 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 RPL26L1Q9UNX3 145 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 ZNF638Q14966 1978 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 DNAJC25-GNG10A0A024R161 153 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 PGM3O95394 542 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 SLC25A27O95847 323 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 MT-CO1P00395 513 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 ERCC2P18074 760 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 PGAM1P18669 254 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 AFF1P51825 1210 aaKnown RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 WSCD1Q658N2 575 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 SIX6OS1Q8N1H7 587 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 CCNYL1Q8N7R7 359 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 APPL2Q8NEU8 664 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 GATA6Q92908 595 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 CDCA5Q96FF9 252 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 FRMD8Q9BZ67 464 aaPredicted RBP14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 S100A14Q9HCY8 104 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 SIP14410 1827 aa14.36□□□□□ -0.11
CACNA1A-228ENST00000636610 PTPRFP10586 1907 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 PAPPA2Q9BXP8 1791 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 SMIM28A0A1B0GU29 152 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 MAGEA13PA6NCF6 341 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 CAPN8A6NHC0 703 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 TMEM233B4DJY2 109 aa14.35□□□□□ -0.11
CACNA1A-228ENST00000636610 BIRC5O15392 142 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms