RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 NOS2P35228 1153 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 FAM193AP78312 1265 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 NME3Q13232 169 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 EIF4EBP2Q13542 120 aaPredicted RBP19.01■□□□□ 0.63
CLN6-214ENST00000636314 SYCP1Q15431 976 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 KIAA0907Q7Z7F0 614 aaPredicted RBP19.01■□□□□ 0.63
CLN6-214ENST00000636314 ERICH1Q86X53 443 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 CFAP52Q8N1V2 620 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 CHCHD4Q8N4Q1 142 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 FIBINQ8TAL6 211 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 NAT10Q9H0A0 1025 aaKnown RBP19.01■□□□□ 0.63
CLN6-214ENST00000636314 CAPN10Q9HC96 672 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 SIK3Q9Y2K2 1263 aa19.01■□□□□ 0.63
CLN6-214ENST00000636314 KCNU1A8MYU2 1149 aa19■□□□□ 0.63
CLN6-214ENST00000636314 EPHB6O15197 1021 aa19■□□□□ 0.63
CLN6-214ENST00000636314 LUC7L3O95232 432 aaKnown RBP19■□□□□ 0.63
CLN6-214ENST00000636314 SYPP08247 313 aa19■□□□□ 0.63
CLN6-214ENST00000636314 DLDP09622 509 aaKnown RBP19■□□□□ 0.63
CLN6-214ENST00000636314 HLA-EP13747 358 aa19■□□□□ 0.63
CLN6-214ENST00000636314 ZNF18P17022 549 aa19■□□□□ 0.63
CLN6-214ENST00000636314 SOX5P35711 763 aa19■□□□□ 0.63
CLN6-214ENST00000636314 NCAPHQ15003 741 aa19■□□□□ 0.63
CLN6-214ENST00000636314 FAM102AQ5T9C2 384 aaPredicted RBP19■□□□□ 0.63
CLN6-214ENST00000636314 CAVIN1Q6NZI2 390 aaKnown RBP19■□□□□ 0.63
CLN6-214ENST00000636314 LRSAM1Q6UWE0 723 aa19■□□□□ 0.63
CLN6-214ENST00000636314 ZNF677Q86XU0 584 aa19■□□□□ 0.63
CLN6-214ENST00000636314 CACUL1Q86Y37 369 aa19■□□□□ 0.63
CLN6-214ENST00000636314 NEK11Q8NG66 645 aa19■□□□□ 0.63
CLN6-214ENST00000636314 PRCCQ92733 491 aaPredicted RBP19■□□□□ 0.63
CLN6-214ENST00000636314 C18orf8Q96DM3 657 aa19■□□□□ 0.63
CLN6-214ENST00000636314 HSPA12BQ96MM6 686 aa19■□□□□ 0.63
CLN6-214ENST00000636314 MKRN2Q9H000 416 aaKnown RBP19■□□□□ 0.63
CLN6-214ENST00000636314 CD93Q9NPY3 652 aa19■□□□□ 0.63
CLN6-214ENST00000636314 STAP1Q9ULZ2 295 aa19■□□□□ 0.63
CLN6-214ENST00000636314 ADAMTS20P59510 1910 aa19■□□□□ 0.63
CLN6-214ENST00000636314 M0QYT0 321 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 ARHGAP33O14559 1287 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 SCNN1AP37088 669 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 MATKP42679 507 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 GABRB2P47870 512 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 JAM2P57087 298 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 RNASE9P60153 205 aaKnown RBP18.99■□□□□ 0.63
CLN6-214ENST00000636314 NOMO3P69849 1222 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 UBXN1Q04323 297 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 MTA1Q13330 715 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 PTPRNQ16849 979 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 ANO6Q4KMQ2 910 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 NAA35Q5VZE5 725 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 TMPRSS6Q8IU80 811 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 SLC41A1Q8IVJ1 513 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 RGL4Q8IZJ4 473 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 ZNF366Q8N895 744 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 SLC20A1Q8WUM9 679 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 SIPA1Q96FS4 1042 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 TMEM245Q9H330 911 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 RRN3Q9NYV6 651 aa18.99■□□□□ 0.63
CLN6-214ENST00000636314 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLN6-214ENST00000636314 NOCTQ9UK39 431 aaKnown RBP18.99■□□□□ 0.63
CLN6-214ENST00000636314 NDUFS2O75306 463 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 MOCS3O95396 460 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 ASLP04424 464 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 CD59P13987 128 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 CSKP41240 450 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 STAT1P42224 750 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 SULT1E1P49888 294 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 COPAP53621 1224 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 CDR2Q01850 454 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 ACAP1Q15027 740 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 ZNF423Q2M1K9 1284 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 RABGAP1LQ5R372 815 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 TTC39BQ5VTQ0 682 aaPredicted RBP18.98■□□□□ 0.63
CLN6-214ENST00000636314 METTL3Q86U44 580 aaKnown RBP18.98■□□□□ 0.63
CLN6-214ENST00000636314 XYLT1Q86Y38 959 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 OR2T3Q8NH03 318 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 CPA5Q8WXQ8 436 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 LMLNQ96KR4 655 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 HSD3B7Q9H2F3 369 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 KIAA1522Q9P206 1035 aaPredicted RBP18.98■□□□□ 0.63
CLN6-214ENST00000636314 USP36Q9P275 1121 aaKnown RBP18.98■□□□□ 0.63
CLN6-214ENST00000636314 PCDHB9Q9Y5E1 797 aa18.98■□□□□ 0.63
CLN6-214ENST00000636314 GOLGA8SH3BPF8 625 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 ACADMP11310 421 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 CD6P30203 668 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 ST8SIA6P61647 398 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 CAMK2GQ13555 558 aaPredicted RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 HNRNPDQ14103 355 aaKnown RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 PLEKHG6Q3KR16 790 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 C2CD6Q53TS8 623 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 FSCBQ5H9T9 825 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 PITRM1Q5JRX3 1037 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 OTUD1Q5VV17 481 aaPredicted RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 MMS22LQ6ZRQ5 1243 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 SND1Q7KZF4 910 aaKnown RBP eCLIP18.97■□□□□ 0.637e-7■□□□□ 8.6
CLN6-214ENST00000636314 CIR1Q86X95 450 aaPredicted RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 CAMK1GQ96NX5 476 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 ERGIC2Q96RQ1 377 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 NPY6RQ99463 290 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 PRMT1Q99873 361 aaKnown RBP18.97■□□□□ 0.63
CLN6-214ENST00000636314 FBRSQ9HAH7 460 aa18.97■□□□□ 0.63
CLN6-214ENST00000636314 PIGVQ9NUD9 493 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms