RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 FSCBQ5H9T9 825 aa19.57■□□□□ 0.72
CLN6-213ENST00000636212 FAM102AQ5T9C2 384 aaPredicted RBP19.57■□□□□ 0.72
CLN6-213ENST00000636212 CCAR2Q8N163 923 aaKnown RBP19.57■□□□□ 0.72
CLN6-213ENST00000636212 PCMTD1Q96MG8 357 aaPredicted RBP19.57■□□□□ 0.72
CLN6-213ENST00000636212 NAA15Q9BXJ9 866 aaKnown RBP19.57■□□□□ 0.72
CLN6-213ENST00000636212 WDCPQ9H6R7 721 aa19.57■□□□□ 0.72
CLN6-213ENST00000636212 SGK2Q9HBY8 427 aa19.57■□□□□ 0.72
CLN6-213ENST00000636212 FSCN3Q9NQT6 498 aa19.57■□□□□ 0.72
CLN6-213ENST00000636212 INTS6Q9UL03 887 aaKnown RBP19.57■□□□□ 0.72
CLN6-213ENST00000636212 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 F8VZ95 297 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 MBD3O95983 291 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 CDH5P33151 784 aaPredicted RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 SULT1E1P49888 294 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 ZNF177Q13360 481 aaPredicted RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 STX1AQ16623 288 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 BRMS1LQ5PSV4 323 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 CDKAL1Q5VV42 579 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 DPY19L2P1Q6NXN4 242 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 MMS22LQ6ZRQ5 1243 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 ZNF677Q86XU0 584 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 DHX40Q8IX18 779 aaKnown RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 ZCCHC9Q8N567 271 aaKnown RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 GPT2Q8TD30 523 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 SPAG5Q96R06 1193 aa19.56■□□□□ 0.72
CLN6-213ENST00000636212 PRMT1Q99873 361 aaKnown RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 RSPH9Q9H1X1 276 aaPredicted RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 MUC22E2RYF6 1773 aaPredicted RBP19.56■□□□□ 0.72
CLN6-213ENST00000636212 BCAT2O15382 392 aaPredicted RBP19.55■□□□□ 0.72
CLN6-213ENST00000636212 SIN3BO75182 1162 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 SEMA4FO95754 770 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 PDGFRAP16234 1089 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 CDK11BP21127 795 aaKnown RBP19.55■□□□□ 0.72
CLN6-213ENST00000636212 GABRB2P47870 512 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 DEUP1Q05D60 604 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 AUHQ13825 339 aaKnown RBP19.55■□□□□ 0.72
CLN6-213ENST00000636212 ARID5BQ14865 1188 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 KRT31Q15323 416 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 ACBD5Q5T8D3 534 aaPredicted RBP19.55■□□□□ 0.72
CLN6-213ENST00000636212 FBXL22Q6P050 247 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 RBM43Q6ZSC3 357 aaKnown RBP19.55■□□□□ 0.72
CLN6-213ENST00000636212 USP30Q70CQ3 517 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 APCDD1Q8J025 514 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 DEFB124Q8NES8 71 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 MRGPRX3Q96LB0 322 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 CNTNAP3BQ96NU0 1288 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 CNTNAP3Q9BZ76 1288 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 SIK2Q9H0K1 926 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 EIF2B4Q9UI10 523 aaKnown RBP19.55■□□□□ 0.72
CLN6-213ENST00000636212 SLC25A13Q9UJS0 675 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 VANGL2Q9ULK5 521 aa19.55■□□□□ 0.72
CLN6-213ENST00000636212 UPK3BL1B0FP48 263 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 UPK3BL2E5RIL1 263 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 GIPC1O14908 333 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 PAGE1O75459 146 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 CLDN11O75508 207 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 C7P10643 843 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 PMLP29590 882 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 ACSL1P33121 698 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 RDXP35241 583 aaKnown RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 POLR2FP61218 127 aaKnown RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 MYL5Q02045 173 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 SLC14A1Q13336 389 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 HNRNPDQ14103 355 aaKnown RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 IL27RAQ6UWB1 636 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 LRRC31Q6UY01 552 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 NOP9Q86U38 636 aaKnown RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 CIR1Q86X95 450 aaPredicted RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 MYO19Q96H55 970 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 RPL10LQ96L21 214 aaKnown RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 NPY6RQ99463 290 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 OMDQ99983 421 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 TKTL2Q9H0I9 626 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 PABPC3Q9H361 631 aaKnown RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 FAM207AQ9NSI2 230 aaPredicted RBP19.54■□□□□ 0.72
CLN6-213ENST00000636212 FANCLQ9NW38 375 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 HS3ST4Q9Y661 456 aa19.54■□□□□ 0.72
CLN6-213ENST00000636212 ITIH6Q6UXX5 1313 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 TTC34A8MYJ7 566 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 GOLGA8SH3BPF8 625 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 GFPT2O94808 682 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 CTSOP43234 321 aaPredicted RBP19.53■□□□□ 0.72
CLN6-213ENST00000636212 SEMA3BQ13214 749 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 TEAD4Q15561 434 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 CST6Q15828 149 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 SLC25A52Q3SY17 297 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 XYLT1Q86Y38 959 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 PGAP3Q96FM1 320 aaPredicted RBP19.53■□□□□ 0.72
CLN6-213ENST00000636212 GANQ9H2C0 597 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 MTG2Q9H4K7 406 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 C6orf106Q9H6K1 298 aaPredicted RBP19.53■□□□□ 0.72
CLN6-213ENST00000636212 PIGVQ9NUD9 493 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 DNAAF2Q9NVR5 837 aaKnown RBP19.53■□□□□ 0.72
CLN6-213ENST00000636212 FBXL12Q9NXK8 326 aa19.53■□□□□ 0.72
CLN6-213ENST00000636212 FSBPO95073 299 aa19.52■□□□□ 0.72
CLN6-213ENST00000636212 CER1O95813 267 aa19.52■□□□□ 0.72
CLN6-213ENST00000636212 ADH1BP00325 375 aa19.52■□□□□ 0.72
CLN6-213ENST00000636212 MMEP08473 750 aa19.52■□□□□ 0.72
CLN6-213ENST00000636212 MZF1P28698 734 aaPredicted RBP19.52■□□□□ 0.72
CLN6-213ENST00000636212 SOX5P35711 763 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms