RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 RAVER2Q9HCJ3 691 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 USP17L5A8MUK1 530 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SNRPAP09012 282 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NPTX2P47972 431 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ST3GAL4Q11206 333 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NFIXQ14938 502 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 OR2L3Q8NG85 312 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SDR42E1Q8WUS8 393 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PTCD2Q8WV60 388 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TCF25Q9BQ70 676 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SHROOM3Q8TF72 1996 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PTPRZ1P23471 2315 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ELK3P41970 407 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CTCFP49711 727 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RIDAP52758 137 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TNFAIP8L3Q5GJ75 292 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SAMD4BQ5PRF9 694 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SEL1L3Q68CR1 1132 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 DSELQ8IZU8 1212 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 OR10H5Q8NGA6 315 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MASTLQ96GX5 879 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ART5Q96L15 291 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RTKNQ9BST9 563 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 HEMGNQ9BXL5 484 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ROGDIQ9GZN7 287 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NCKIPSDQ9NZQ3 722 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 KCND2Q9NZV8 630 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PCDHB11Q9Y5F2 797 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 DOCK7Q96N67 2140 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ARHGEF11O15085 1522 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SYNMO15061 1565 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SLC26A4O43511 780 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TPBGLP0DKB5 382 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 GTF2H1P32780 548 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SOX11P35716 441 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NAMPTP43490 491 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NDUFA8P51970 172 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CACNA2D1P54289 1103 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 EMC2Q15006 297 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ZCWPW2Q504Y3 356 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ZNF527Q8NB42 609 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SETD6Q8TBK2 473 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 DNAJC9Q8WXX5 260 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 GLT1D1Q96MS3 346 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 FUT8Q9BYC5 575 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RRAGDQ9NQL2 400 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CATSPERZQ9NTU4 200 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MSRAQ9UJ68 235 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 DNPEPQ9ULA0 475 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 RIMKLBQ9ULI2 386 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PCDHGC3Q9UN70 934 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 EFR3BQ9Y2G0 817 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MROH7-TTC4A0A0A0MT08 1334 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MROH7Q68CQ1 1323 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NUP214P35658 2090 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MYMKA6NI61 221 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CCRL2O00421 344 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PHF2O75151 1096 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CCNDBP1O95273 360 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 C6orf222P0C671 652 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NAA20P61599 178 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CREB5Q02930 508 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 BNIP2Q12982 314 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 CYP2A13Q16696 494 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 EIF5AL1Q6IS14 154 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 FBXO38Q6PIJ6 1188 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NET1Q7Z628 596 aaPredicted RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ADHFE1Q8IWW8 467 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 BLOC1S5Q8TDH9 187 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 IP6K1Q92551 441 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 S100PBPQ96BU1 408 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NOS1P29475 1434 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 TRIOBPQ9H2D6 2365 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MPDZO75970 2070 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PCNX2A6NKB5 2137 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MSH4O15457 936 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SNAP91O60641 907 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SNAPC5O75971 98 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 SUPT20HL2P0C7V6 817 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 C1QBPQ07021 282 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PTK7Q13308 1070 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 BYSLQ13895 437 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 GIT2Q14161 759 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 NECAB2Q7Z6G3 386 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MIER2Q8N344 545 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MRPL50Q8N5N7 158 aaKnown RBP6.12□□□□□ -1.43
SCN1A-212ENST00000636194 WDCPQ9H6R7 721 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ACTR8Q9H981 624 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 IFT46Q9NQC8 304 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 VPS45Q9NRW7 570 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 MTMR10Q9NXD2 777 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 ERGIC3Q9Y282 383 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 POLEQ07864 2286 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 OR5H15A6NDH6 313 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 OR5H14A6NHG9 310 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 OR5H1A6NKK0 313 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 GRIN3BO60391 1043 aa6.12□□□□□ -1.43
SCN1A-212ENST00000636194 PSIP1O75475 530 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms