RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 PAFAH2Q99487 392 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 CLSTN3Q9BQT9 956 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 PSMC3IPQ9P2W1 217 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 IGLV3-10A0A075B6K4 115 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 RASA4BC9J798 803 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 FGF10O15520 208 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 MTSS1O43312 755 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 RASA4O43374 803 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 ABLIM3O94929 683 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 FAM107AO95990 144 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 SRGAP2BP0DMP2 458 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 HNRNPH2P55795 449 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 DEFB103AP81534 67 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 NR1H3Q13133 447 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 TMED2Q15363 201 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 KLHL38Q2WGJ6 581 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 TEX44Q53QW1 395 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 LRRC8BQ6P9F7 803 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 CYS1Q717R9 158 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 PRPF39Q86UA1 669 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 SLC44A1Q8WWI5 657 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 TRIM43Q96BQ3 446 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 TBC1D31Q96DN5 1066 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 SEPT5Q99719 369 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 EBNA1BP2Q99848 306 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 SELENOSQ9BQE4 189 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 NOL6Q9H6R4 1146 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 PRDM5Q9NQX1 630 aaPredicted RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 OBSL1O75147 1896 aa12.85□□□□□ -0.35
CACNA1A-219ENST00000635917 GMNCA6NCL1 334 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 E9PAM4 449 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 MAFKO60675 156 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 STK10O94804 968 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 SUN1O94901 812 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 TIMP1P01033 207 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 GSTA2P09210 222 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 BRAFP15056 766 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 RPL17P18621 184 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 OR1D2P34982 312 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 SLC18A1P54219 525 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 TBX4P57082 545 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 RPL10AP62906 217 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 TRIP4Q15650 581 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 PSMD5Q16401 504 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 KBTBD12Q3ZCT8 623 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 SNX30Q5VWJ9 437 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 STEAP4Q687X5 459 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 UNC5AQ6ZN44 842 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 ARHGAP36Q6ZRI8 547 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 PID1Q7Z2X4 250 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 TMCO2Q7Z6W1 182 aaPredicted RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 SRRM1Q8IYB3 904 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 SLC39A11Q8N1S5 342 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 LZTR1Q8N653 840 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 CNTD1Q8N815 330 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 RTL3Q8N8U3 475 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 DENND1AQ8TEH3 1009 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 PAWRQ96IZ0 340 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 TEKT5Q96M29 485 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 CCT8L2Q96SF2 557 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 CYTH2Q99418 400 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 VAT1Q99536 393 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 FERMT1Q9BQL6 677 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 TRIM56Q9BRZ2 755 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 RABEP2Q9H5N1 569 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 PPANQ9NQ55 473 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 SMYD2Q9NRG4 433 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 OLA1Q9NTK5 396 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 INTS9Q9NV88 658 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 MOCS1Q9NZB8 636 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 HSFX1Q9UBD0 423 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 ZC3H7BQ9UGR2 993 aaKnown RBP12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 TRHDEQ9UKU6 1024 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 DENND4CQ5VZ89 1909 aa12.84□□□□□ -0.35
CACNA1A-219ENST00000635917 SLC38A8A6NNN8 435 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 TRDMT1O14717 391 aaKnown RBP12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 ZBTB24O43167 697 aaPredicted RBP12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 PRPF4O43172 522 aaKnown RBP eCLIP12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 TYROBPO43914 113 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 FAM155BO75949 473 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 SOD2P04179 222 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 SLC2A3P11169 496 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 ATP2A2P16615 1042 aaKnown RBP12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 CCNCP24863 283 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 DSG1Q02413 1049 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 RING1Q06587 406 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 RWDD4Q6NW29 188 aaKnown RBP12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 SH2D5Q6ZV89 423 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 PRMT1Q99873 361 aaKnown RBP12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 MLPHQ9BV36 600 aaPredicted RBP12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 SLC39A8Q9C0K1 460 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 GBA3Q9H227 469 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 CATSPERBQ9H7T0 1116 aa12.83□□□□□ -0.35
CACNA1A-219ENST00000635917 KIF9Q9HAQ2 790 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms