RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RPL21P46778 160 aaKnown RBP5.66□□□□□ -1.5
SCN1A-209ENST00000635750 ARID5BQ14865 1188 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 ALX1Q15699 326 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 METTL3Q86U44 580 aaKnown RBP5.66□□□□□ -1.5
SCN1A-209ENST00000635750 CACUL1Q86Y37 369 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 SLC4A11Q8NBS3 891 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 MS4A14Q96JA4 679 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 C6orf62Q9GZU0 229 aaPredicted RBP5.66□□□□□ -1.5
SCN1A-209ENST00000635750 NMRAL1Q9HBL8 299 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 ASAH2Q9NR71 780 aa5.66□□□□□ -1.5
SCN1A-209ENST00000635750 MRPS33Q9Y291 106 aaKnown RBP5.66□□□□□ -1.5
SCN1A-209ENST00000635750 ESYT3A0FGR9 886 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ASNA1O43681 348 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 BAIAP3O94812 1187 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CSH1P0DML2 217 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CSH2P0DML3 217 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 MDH1P40925 334 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 RPS6KA3P51812 740 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SMIM11AP58511 58 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 IRX1P78414 480 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SUZ12Q15022 739 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 NAB2Q15742 525 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 RBM43Q6ZSC3 357 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 EIF3MQ7L2H7 374 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ATCAYQ86WG3 371 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 LRRC6Q86X45 466 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 OR10H5Q8NGA6 315 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 DNAJC9Q8WXX5 260 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CELF1Q92879 486 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CHAMP1Q96JM3 812 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SERPINB11Q96P15 392 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 QKIQ96PU8 341 aaKnown RBP eCLIP5.65□□□□□ -1.51e-6■■■■□ 23.5
SCN1A-209ENST00000635750 ASB2Q96Q27 587 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 GPER1Q99527 375 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 C7orf25Q9BPX7 421 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 DDX43Q9NXZ2 648 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SNX13Q9Y5W8 968 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 NEO1Q92859 1461 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 GSAPA4D1B5 854 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 MAGEC1O60732 1142 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TCEA3O75764 348 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ALPPL2P10696 532 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 UCHL3P15374 230 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 VEGFAP15692 232 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 PSMB9P28065 219 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 GLRBP48167 497 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 NR2C2P49116 596 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CASP4P49662 377 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SCRN3Q0VDG4 424 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 INAVAQ3KP66 663 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TIMM50Q3ZCQ8 353 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 C9orf131Q5VYM1 1079 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ADSSL1Q8N142 457 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 FBXO39Q8N4B4 442 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 OR5T3Q8NGG3 340 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 NKX2-3Q8TAU0 364 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ATL1Q8WXF7 558 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 FAM126AQ9BYI3 521 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 LMAN2LQ9H0V9 348 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 PABPC3Q9H361 631 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ATP13A1Q9HD20 1204 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 GNPTGQ9UJJ9 305 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 PCDHGC5Q9Y5F6 944 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 UNC13AQ9UPW8 1703 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TTC26A0AVF1 554 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 FGF19O95750 216 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TFPIP10646 304 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ATP1A3P13637 1013 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 MASP1P48740 699 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 STXBP1P61764 594 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 DMTNQ08495 405 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 BST2Q10589 180 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TRAP1Q12931 704 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SLC29A2Q14542 456 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CCDC153Q494R4 210 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 PLEKHA7Q6IQ23 1121 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CHRDL2Q6WN34 429 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 MSANTD1Q6ZTZ1 278 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TBC1D16Q8TBP0 767 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ERP27Q96DN0 273 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 VPS35Q96QK1 796 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 PI4K2AQ9BTU6 479 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TARS2Q9BW92 718 aaKnown RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ADAM33Q9BZ11 813 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 BRINP2Q9C0B6 783 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 ANKRD6Q9Y2G4 727 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 TRIM49D1C9J1S8 452 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 WRBO00258 174 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CACNB4O00305 520 aaPredicted RBP5.65□□□□□ -1.5
SCN1A-209ENST00000635750 CPA3P15088 417 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 DGKAP23743 735 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 VHLP40337 213 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 DLG1Q12959 904 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 MYBPC3Q14896 1274 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 VPS72Q15906 364 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SNAP47Q5SQN1 464 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 RAET1GQ6H3X3 334 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 NRSN1Q8IZ57 195 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 OMA1Q96E52 524 aa5.65□□□□□ -1.5
SCN1A-209ENST00000635750 SH2D3AQ9BRG2 576 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms