RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 ABRQ12979 859 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 FASTKQ14296 549 aaKnown RBP17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 ZNF697Q5TEC3 545 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 ACAD10Q6JQN1 1059 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 CDC42EP5Q6NZY7 148 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 ZNF613Q6PF04 617 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 MCOLN3Q8TDD5 553 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 SLC20A1Q8WUM9 679 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 ZFP14Q9HCL3 533 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 TBX20Q9UMR3 447 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 SPEF1Q9Y4P9 236 aa17.73■□□□□ 0.43
CACNA1A-215ENST00000635727 TMEM114B3SHH9 223 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 DDX3XO00571 662 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 EIF3HO15372 352 aaKnown RBP eCLIP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 MTSS1O43312 755 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 GLRA3O75311 464 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 CLPTM1O96005 669 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 SEMA4BQ9NPR2 832 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 MBD2Q9UBB5 411 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 TBC1D24Q9ULP9 559 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 KRR1Q13601 381 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 SLC39A12Q504Y0 691 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 EEF1AKMT1Q8WVE0 214 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 TMEM237Q96Q45 408 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 KCNH7Q9NS40 1196 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 FLT1P17948 1338 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 CCT8L1PA6NM43 557 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 GHRP10912 638 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 CYP4B1P13584 511 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 MAGP20916 626 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 NECTIN1Q15223 517 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 GSG1L2A8MUP6 293 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 CD3EAPO15446 510 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 PGM3O95394 542 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 TOP3BO95985 862 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 OR56A5P0C7T3 313 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 FBXO28Q9NVF7 368 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 SNCAIPQ9Y6H5 919 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 PLXNC1O60486 1568 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 PDXKO00764 312 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 RTN3O95197 1032 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 MGAT1P26572 445 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 BTN3A2P78410 334 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 C4orf46Q504U0 113 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 PITRM1Q5JRX3 1037 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 CLVS1Q8IUQ0 354 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 SUGP1Q8IWZ8 645 aaKnown RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 BPIFB6Q8NFQ5 453 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 CORO1BQ9BR76 489 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 DEFB129Q9H1M3 183 aa17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 PRMT7Q9NVM4 692 aaPredicted RBP17.72■□□□□ 0.43
CACNA1A-215ENST00000635727 PHGDHO43175 533 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ZNF366Q8N895 744 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ATP13A1Q9HD20 1204 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 STAP2Q9UGK3 403 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 CYP2C8P10632 490 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 RPL9P32969 192 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 BUD31P41223 144 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ZNHIT3Q15649 155 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 TFDP3Q5H9I0 405 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 GUF1Q8N442 669 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 RXFP2Q8WXD0 754 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 VPS33AQ96AX1 596 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 PCDHA11Q9Y5I1 949 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 SEPT4O43236 478 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 RBM43Q6ZSC3 357 aaKnown RBP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 HIPK1Q86Z02 1210 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ARL10Q8N8L6 244 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 MXRA8Q9BRK3 442 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 NOD2Q9HC29 1040 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ARL15Q9NXU5 204 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 IGSF9BQ9UPX0 1349 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ANO9A1A5B4 782 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 EIF3DO15371 548 aaKnown RBP eCLIP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ATP9AO75110 1047 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 AMPD2Q01433 879 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 KCTD19Q17RG1 926 aaPredicted RBP17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 WDR93Q6P2C0 686 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 FBXO39Q8N4B4 442 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 CXorf40BQ96DE9 158 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 ZNF879B4DU55 563 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 CHRNGP07510 517 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 TRIM17Q9Y577 477 aa17.71■□□□□ 0.43
CACNA1A-215ENST00000635727 H3BMM5 538 aa17.71■□□□□ 0.42
CACNA1A-215ENST00000635727 ZNF806P0C7X5 589 aa17.71■□□□□ 0.42
CACNA1A-215ENST00000635727 CENPCQ03188 943 aa17.71■□□□□ 0.42
CACNA1A-215ENST00000635727 PTGISQ16647 500 aa17.71■□□□□ 0.42
CACNA1A-215ENST00000635727 OR52L1Q8NGH7 329 aa17.71■□□□□ 0.42
CACNA1A-215ENST00000635727 NARFQ9UHQ1 456 aa17.71■□□□□ 0.42
CACNA1A-215ENST00000635727 EPN2O95208 641 aa17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 TBX4P57082 545 aa17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 CHERPQ8IWX8 916 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 ZNF579Q8NAF0 562 aaKnown RBP17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 ADPRHL2Q9NX46 363 aa17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 PHF24Q9UPV7 400 aa17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 MAGEA13PA6NCF6 341 aa17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 SLC41A1Q8IVJ1 513 aa17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 OR5T3Q8NGG3 340 aa17.7■□□□□ 0.42
CACNA1A-215ENST00000635727 GPR152Q8TDT2 470 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms