RNA–Protein interactions for RNA: ENST00000635206.1

CCDC149-208, Transcript of coiled-coil domain containing 149, human

APPRIS ALT2 TSL 5 BASIC

Gene CCDC149, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC149-208	ENST00000635206	COMMD8	Q9NX08	183 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	IGSF9	Q9P2J2	1179 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	AFF4	Q9UHB7	1163 aa	Known RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	NUP205	Q92621	2012 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	TCRBV9S1A1T	A0A576	114 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	TUFM	P49411	452 aa	Known RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	PSEN1	P49768	467 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	SEC24C	P53992	1094 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	PKN2	Q16513	984 aa	Known RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	LEKR1	Q6ZMV7	388 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	TAOK1	Q7L7X3	1001 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	PRPF39	Q86UA1	669 aa	Known RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	CMTR2	Q8IYT2	770 aa	Known RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	TMEM199	Q8N511	208 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	USP33	Q8TEY7	942 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	DPF3	Q92784	378 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	C1orf74	Q96LT6	269 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	HERC2P3	Q9BVR0	1158 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	BRD8	Q9H0E9	1235 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	CYP4F11	Q9HBI6	524 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	PPAN	Q9NQ55	473 aa	Known RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	SPG21	Q9NZD8	308 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	MAD1L1	Q9Y6D9	718 aa		13.81	□□□□□ -0.2
CCDC149-208	ENST00000635206	KIAA0100	Q14667	2235 aa	Known RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	CLGN	O14967	610 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	FGF10	O15520	208 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	CNTN5	O94779	1100 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	ABLIM3	O94929	683 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	JCHAIN	P01591	159 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	APOE	P02649	317 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	SLC2A3	P11169	496 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	TSHR	P16473	764 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	ATP5D	P30049	168 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	CRADD	P78560	199 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	FOXR1	Q6PIV2	292 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	C16orf59	Q7L2K0	433 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	TADA2B	Q86TJ2	420 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	RTL3	Q8N8U3	475 aa	Known RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	ZNF461	Q8TAF7	563 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	YME1L1	Q96TA2	773 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	UBE2O	Q9C0C9	1292 aa	Known RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	OLA1	Q9NTK5	396 aa	Known RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	TTLL3	Q9Y4R7	772 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	GOLGA6L7	A0A1B0GV03	622 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	CP	P00450	1065 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	IGLV3-27	P01718	113 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	HMGA1	P17096	107 aa	Known RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	LAG3	P18627	525 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	NRG1	Q02297	640 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	MPP2	Q14168	576 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	RAP1GAP2	Q684P5	730 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	TFAP2D	Q7Z6R9	452 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	RIBC1	Q8N443	379 aa	Predicted RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	IGSF8	Q969P0	613 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	MYEOV	Q96EZ4	313 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	PAFAH2	Q99487	392 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	KIF9	Q9HAQ2	790 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	XAB2	Q9HCS7	855 aa	Known RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	EIF2B3	Q9NR50	452 aa	Known RBP	13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	RSPH14	Q9UHP6	348 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	SLC24A2	Q9UI40	661 aa		13.8	□□□□□ -0.2
CCDC149-208	ENST00000635206	MYO18A	Q92614	2054 aa	Known RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	TMEM120B	A0PK00	339 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206		A6NNZ2	444 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	RASA4B	C9J798	803 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	RASA4	O43374	803 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	GJB5	O95377	273 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	BRAF	P15056	766 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	ATP2A2	P16615	1042 aa	Known RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	NFKB1	P19838	968 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	HTR7	P34969	479 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	KCNQ1	P51787	676 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	SESN2	P58004	480 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	C1QTNF8	P60827	252 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	KLHL38	Q2WGJ6	581 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	TUBB8	Q3ZCM7	444 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	KBTBD12	Q3ZCT8	623 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	TEX44	Q53QW1	395 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	ALF	Q53S48	1182 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	AFMID	Q63HM1	303 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	LRRC8B	Q6P9F7	803 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	UNC5A	Q6ZN44	842 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	DDX53	Q86TM3	631 aa	Known RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	TRABD2A	Q86V40	505 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	NLRP14	Q86W24	1093 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	ATPAF2	Q8N5M1	289 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	ATP6V0D2	Q8N8Y2	350 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	MGARP	Q8TDB4	240 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	DCAKD	Q8WVC6	231 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	BTN2A3P	Q96KV6	586 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	ZNF512	Q96ME7	567 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	EBNA1BP2	Q99848	306 aa	Known RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	DHRS4	Q9BTZ2	278 aa		13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	MLPH	Q9BV36	600 aa	Predicted RBP	13.79	□□□□□ -0.2
CCDC149-208	ENST00000635206	NOL6	Q9H6R4	1146 aa	Known RBP	13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms