RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CACNG4Q9UBN1 327 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 RABGEF1Q9UJ41 708 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 TSR3Q9UJK0 312 aaKnown RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 SNX5Q9Y5X3 404 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 IKBKGQ9Y6K9 419 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 ATXN2Q99700 1313 aaKnown RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 SYNJ2BP-COX16A0A087WUM0 186 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 A0A1W2PQ45 241 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 A0A1W2PQY0 241 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 TCRBV7S3A2A0A539 114 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 YJEFN3A6XGL0 299 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 E7ENQ6 273 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 NRP1O14786 923 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 MTSS1O43312 755 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 OPHN1O60890 802 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 COQ9O75208 318 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 SLC4A1P02730 911 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 INHAP05111 366 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 EN2P19622 333 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 MX2P20592 715 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 IGFBP6P24592 240 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 STX2P32856 288 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 HTR7P34969 479 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 GLUD2P49448 558 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 GPX6P59796 221 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 GBE1Q04446 702 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 YWHAHQ04917 246 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 CBX2Q14781 532 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 SYPL2Q5VXT5 272 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 FOXR1Q6PIV2 292 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 CD300LGQ6UXG3 332 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 TRABD2AQ86V40 505 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 SRRM1Q8IYB3 904 aaKnown RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 CACNA2D3Q8IZS8 1091 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 RELTQ969Z4 430 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 ALKBH8Q96BT7 664 aaKnown RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 OLFM3Q96PB7 478 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 KCNK16Q96T55 309 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 PAAF1Q9BRP4 392 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 ADAM33Q9BZ11 813 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 OSBPL7Q9BZF2 842 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 TRPV6Q9H1D0 765 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 RABEP2Q9H5N1 569 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 ELAC1Q9H777 363 aaKnown RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 ETNK1Q9HBU6 452 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 SSU72Q9NP77 194 aaKnown RBP7.36□□□□□ -1.23
BRCA1-230ENST00000634433 DDIT4Q9NX09 232 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.36□□□□□ -1.237e-7■□□□□ 9.9
BRCA1-230ENST00000634433 COX16Q9P0S2 106 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 PHF24Q9UPV7 400 aa7.36□□□□□ -1.23
BRCA1-230ENST00000634433 A0A0A0MRY4 1105 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 IQANK1A0A1B0GTG1 560 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 FAM47DPA6NHR8 397 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 PRPF4O43172 522 aaKnown RBP eCLIP7.35□□□□□ -1.231e-8■■■□□ 15.4
BRCA1-230ENST00000634433 MLNP12872 115 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SELPP16109 830 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 DRD4P21917 467 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ENPP1P22413 925 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SERPINB6P35237 376 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ELK3P41970 407 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CXCR3P49682 368 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TPI1P60174 286 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 IL9RQ01113 521 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CAP1Q01518 475 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SFSWAPQ12872 951 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SLC10A2Q12908 348 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 RAB33AQ14088 237 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 MSS51Q4VC12 460 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 HP1BP3Q5SSJ5 553 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 LGSNQ5TDP6 509 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 OTUD1Q5VV17 481 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 LHX8Q68G74 356 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ADGRD1Q6QNK2 874 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 VSTM1Q6UX27 236 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 RFX8Q6ZV50 586 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 HFE2Q6ZVN8 426 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 YTHDF3Q7Z739 585 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 STRA8Q7Z7C7 330 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TAX1BP1Q86VP1 789 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CYP4X1Q8N118 509 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 PYROXD2Q8N2H3 581 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ANKS4BQ8N8V4 417 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 FBF1Q8TES7 1133 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SPATA13Q96N96 652 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 PKMYT1Q99640 499 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 PRMT1Q99873 361 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 COLEC11Q9BWP8 271 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TRABDQ9H4I3 376 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 ABCC13Q9NSE7 274 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 PIGVQ9NUD9 493 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TMEM161AQ9NX61 479 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 SAMD15Q9P1V8 674 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CTNNAL1Q9UBT7 734 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 EGFL7Q9UHF1 273 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 RRP15Q9Y3B9 282 aaKnown RBP7.35□□□□□ -1.23
BRCA1-230ENST00000634433 TEX264Q9Y6I9 313 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 CLUHO75153 1309 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 GOLGA6L7A0A1B0GV03 622 aa7.35□□□□□ -1.23
BRCA1-230ENST00000634433 I3L4J1 428 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms