RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 EDDM13A0A1B0GTR0 161 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3FA6NER0 549 aaPredicted RBP20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TTC34A8MYJ7 566 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3LB9A6J9 549 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 ADH1BP00325 375 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 SRPRAP08240 638 aaKnown RBP20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3HP0C7X1 549 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 GOT1P17174 413 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 ACP1P24666 158 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 PSMD8P48556 350 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 MXI1P50539 228 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 DAOAP59103 153 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 ADAM9Q13443 819 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 FOXD4L5Q5VV16 416 aaPredicted RBP20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3GQ6DHY5 549 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3CQ6IPX1 549 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 MSANTD2Q6P1R3 559 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 KANSL1Q7Z3B3 1105 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 CCDC117Q8IWD4 279 aaPredicted RBP20.87■□□□□ 0.93
TARDBP-228ENST00000629725 TBC1D3Q8IZP1 549 aaPredicted RBP20.87■□□□□ 0.93
TARDBP-228ENST00000629725 CARNMT1Q8N4J0 409 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 DCBLD1Q8N8Z6 715 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 MFSD2AQ8NA29 543 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 UBA3Q8TBC4 463 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 FOXD4L4Q8WXT5 416 aaPredicted RBP20.87■□□□□ 0.93
TARDBP-228ENST00000629725 KCTD13Q8WZ19 329 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 FAM129BQ96TA1 746 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 LGMNQ99538 433 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 ERVW-1Q9UQF0 538 aa20.87■□□□□ 0.93
TARDBP-228ENST00000629725 MYL1P05976 194 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 LCP1P13796 627 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 C5AR1P21730 350 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 KCNH2Q12809 1159 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 CDH18Q13634 790 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 TAF1BQ53T94 588 aaPredicted RBP20.86■□□□□ 0.93
TARDBP-228ENST00000629725 SPATS2Q86XZ4 545 aaKnown RBP20.86■□□□□ 0.93
TARDBP-228ENST00000629725 SCML4Q8N228 414 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 ZNF248Q8NDW4 579 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 AZIN2Q96A70 460 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 PRICKLE1Q96MT3 831 aaPredicted RBP20.86■□□□□ 0.93
TARDBP-228ENST00000629725 DDX50Q9BQ39 737 aaKnown RBP20.86■□□□□ 0.93
TARDBP-228ENST00000629725 MAPK8IP1Q9UQF2 711 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 CEP83Q9Y592 693 aa20.86■□□□□ 0.93
TARDBP-228ENST00000629725 DOCK9Q9BZ29 2069 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 LATO43561 262 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 MAGEC1O60732 1142 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 SETSIPP0DME0 302 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 CD19P15391 556 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 CTSOP43234 321 aaPredicted RBP20.85■□□□□ 0.93
TARDBP-228ENST00000629725 TBX4P57082 545 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 PPP2CBP62714 309 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 RPS24P62847 133 aaKnown RBP20.85■□□□□ 0.93
TARDBP-228ENST00000629725 PPP2CAP67775 309 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 E2F1Q01094 437 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 FSCBQ5H9T9 825 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 PITRM1Q5JRX3 1037 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 NADSYN1Q6IA69 706 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 NAPEPLDQ6IQ20 393 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 KDM7AQ6ZMT4 941 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 MMS22LQ6ZRQ5 1243 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 COL6A6A6NMZ7 2263 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 MYO18BQ8IUG5 2567 aa20.85■□□□□ 0.93
TARDBP-228ENST00000629725 ITIH6Q6UXX5 1313 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 MOCS3O95396 460 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 IL1BP01584 269 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 MCCD1P59942 119 aaPredicted RBP20.84■□□□□ 0.93
TARDBP-228ENST00000629725 ECT2LQ008S8 904 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 PROX2Q3B8N5 592 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 RNF219Q5W0B1 726 aaPredicted RBP20.84■□□□□ 0.93
TARDBP-228ENST00000629725 PRPF39Q86UA1 669 aaKnown RBP20.84■□□□□ 0.93
TARDBP-228ENST00000629725 IQCHQ86VS3 1027 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 STK40Q8N2I9 435 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 PTPRN2Q92932 1015 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 MYEOVQ96EZ4 313 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 NAF1Q96HR8 494 aaKnown RBP20.84■□□□□ 0.93
TARDBP-228ENST00000629725 ARHGAP20Q9P2F6 1191 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 SLCO3A1Q9UIG8 710 aa20.84■□□□□ 0.93
TARDBP-228ENST00000629725 K7ELQ4 463 aaPredicted RBP20.83■□□□□ 0.93
TARDBP-228ENST00000629725 STX10O60499 249 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 SDC3O75056 442 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 RHOBTB3O94955 611 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 MT-CO3P00414 261 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 MZF1P28698 734 aaPredicted RBP20.83■□□□□ 0.93
TARDBP-228ENST00000629725 PCBP4P57723 403 aaKnown RBP20.83■□□□□ 0.93
TARDBP-228ENST00000629725 TMPRSS3P57727 454 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 OVGP1Q12889 678 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 BROXQ5VW32 411 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.83■□□□□ 0.93
TARDBP-228ENST00000629725 CFAP52Q8N1V2 620 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 IRGQQ8WZA9 623 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.93
TARDBP-228ENST00000629725 RPL10LQ96L21 214 aaKnown RBP20.83■□□□□ 0.93
TARDBP-228ENST00000629725 USP25Q9UHP3 1055 aa20.83■□□□□ 0.93
TARDBP-228ENST00000629725 O00370 1275 aa20.82■□□□□ 0.92
TARDBP-228ENST00000629725 PIK3R2O00459 728 aa20.82■□□□□ 0.92
TARDBP-228ENST00000629725 SIGLEC6O43699 453 aa20.82■□□□□ 0.92
TARDBP-228ENST00000629725 LUC7L3O95232 432 aaKnown RBP20.82■□□□□ 0.92
TARDBP-228ENST00000629725 LTFP02788 710 aa20.82■□□□□ 0.92
TARDBP-228ENST00000629725 VDRP11473 427 aa20.82■□□□□ 0.92
TARDBP-228ENST00000629725 MAT2AP31153 395 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms