RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 NR2E3Q9Y5X4 410 aa13.44□□□□□ -0.26
SYNGAP1-208ENST00000629380 MYBL2P10244 700 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 FAUP35544 74 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 SPIRE1Q08AE8 756 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 TRAP1Q12931 704 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 SLC29A2Q14542 456 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 EVPLQ92817 2033 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 ANKRD65E5RJM6 399 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 M0QYT0 321 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 LYNP07948 512 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 THPOP40225 353 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 INHBEP58166 350 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 RHOAP61586 193 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 HSF2Q03933 536 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 NECAB2Q7Z6G3 386 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 TBCDQ9BTW9 1192 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 CLN6Q9NWW5 311 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PTPN4P29074 926 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 CCNIQ14094 377 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF280DQ6N043 979 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 C11orf63Q6NUN7 778 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 DEFB107AQ8IZN7 70 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 FNDC5Q8NAU1 212 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 DPF3Q92784 378 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PAFAH2Q99487 392 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 TNPO3Q9Y5L0 923 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 MROH7Q68CQ1 1323 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 AVILO75366 819 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PRG2P13727 222 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PGAM1P18669 254 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 TNNI3P19429 210 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 DNAJC3Q13217 504 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PEX5LQ8IYB4 626 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 MPP4Q96JB8 637 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 TEX33O43247 280 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 RTN3O95197 1032 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 FAM187BQ17R55 369 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PDPK2PQ6A1A2 396 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 ABRAXAS1Q6UWZ7 409 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 IZUMO2Q6UXV1 221 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 RIT2Q99578 217 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 GPAMQ9HCL2 828 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 MAP10Q9P2G4 905 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 RSL24D1Q9UHA3 163 aaKnown RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 LOC100653049A0A140TA62 436 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PDX1P52945 283 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 SPIDRQ14159 915 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 CCNI2Q6ZMN8 369 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 SLC44A5Q8NCS7 719 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 GSG1L2A8MUP6 293 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 XYLBO75191 536 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF135P52742 658 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 NME5P56597 212 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 TOP3AQ13472 1001 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 MAPK11Q15759 364 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 GRTP1Q5TC63 336 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 SMYD1Q8NB12 490 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 DPY30Q9C005 99 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 S100A6P06703 90 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 CXCR2P25025 360 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 NFE2Q16621 373 aaPredicted RBP13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 WDR60Q8WVS4 1066 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 PHF20Q9BVI0 1012 aa13.43□□□□□ -0.26
SYNGAP1-208ENST00000629380 TPRP12270 2363 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 STX16-NPEPL1H3BU86 382 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 STX16O14662 325 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 INPP4BO15327 924 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 PRODHO43272 600 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 SNX4O95219 450 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZNF484Q5JVG2 852 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 PAGE2Q7Z2X7 111 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 FBXO39Q8N4B4 442 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 CYLDQ9NQC7 956 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 ITGA11Q9UKX5 1188 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 KCNH1O95259 989 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 ITGA2P17301 1181 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 OGNP20774 298 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 EIF2S3P41091 472 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 FBXO36Q8NEA4 188 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 ZSCAN18Q8TBC5 510 aaPredicted RBP13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 NMD3Q96D46 503 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 PANX3Q96QZ0 392 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 YME1L1Q96TA2 773 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 UBP1Q9NZI7 540 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 PP2D1A8MPX8 630 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 KPNA5O15131 536 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 PGM3O95394 542 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 CSF1RP07333 972 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 CBX5P45973 191 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 MAPK9P45984 424 aa13.42□□□□□ -0.26
SYNGAP1-208ENST00000629380 ARFIP1P53367 373 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms