RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 PCDHB12Q9Y5F1 795 aa19.65■□□□□ 0.74
PTBP1-220ENST00000627714 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.64■□□□□ 0.74
PTBP1-220ENST00000627714 M0QYT0 321 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 MTSS1O43312 755 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 CREB3O43889 395 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 USP1O94782 785 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 AP2A1O95782 977 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 FAM163BP0C2L3 166 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 ERVK-10P10266 1014 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 NPR3P17342 541 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 TKTP29401 623 aaKnown RBP19.64■□□□□ 0.74
PTBP1-220ENST00000627714 CCNHP51946 323 aaPredicted RBP19.64■□□□□ 0.74
PTBP1-220ENST00000627714 BTKQ06187 659 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 PDPK2PQ6A1A2 396 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 MAVSQ7Z434 540 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 TMEM135Q86UB9 458 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 ACTRT2Q8TDY3 377 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 NTAN1Q96AB6 310 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 FAM49AQ9H0Q0 323 aaPredicted RBP19.64■□□□□ 0.74
PTBP1-220ENST00000627714 VCX3BQ9H321 246 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 LRRC4Q9HBW1 653 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 SETD4Q9NVD3 440 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 KLHL8Q9P2G9 620 aaPredicted RBP19.64■□□□□ 0.74
PTBP1-220ENST00000627714 MID2Q9UJV3 735 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 ASB3Q9Y575 518 aa19.64■□□□□ 0.74
PTBP1-220ENST00000627714 MYO18AQ92614 2054 aaKnown RBP19.64■□□□□ 0.73
PTBP1-220ENST00000627714 SMIM35A0A1B0GVV1 85 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 ARHGAP42A6NI28 874 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 TMEM114B3SHH9 223 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 ZNF195O14628 629 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 MLH1P40692 756 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 METTL21CQ5VZV1 264 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 OR52E8Q6IFG1 317 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 KBTBD2Q8IY47 623 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 SIX6OS1Q8N1H7 587 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 DCLK2Q8N568 766 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 OR6J1Q8NGC5 347 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 LBHD1Q9BQE6 289 aaPredicted RBP19.64■□□□□ 0.73
PTBP1-220ENST00000627714 S100A14Q9HCY8 104 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 PNPOQ9NVS9 261 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 PIH1D1Q9NWS0 290 aaKnown RBP19.64■□□□□ 0.73
PTBP1-220ENST00000627714 PDP2Q9P2J9 529 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 GJD2Q9UKL4 321 aa19.64■□□□□ 0.73
PTBP1-220ENST00000627714 MAGEB16A2A368 324 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 MEI4A8MW99 385 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 SNAI1O95863 264 aaPredicted RBP19.63■□□□□ 0.73
PTBP1-220ENST00000627714 AKAP5P24588 427 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 HCAR3P49019 387 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 TUBP50607 506 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 TMEM62Q0P6H9 643 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 SCAPQ12770 1279 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 PPM1JQ5JR12 505 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 INTS6LQ5JSJ4 861 aaKnown RBP19.63■□□□□ 0.73
PTBP1-220ENST00000627714 IZUMO2Q6UXV1 221 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 OSMRQ99650 979 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 ECSITQ9BQ95 431 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 CCDC28BQ9BUN5 200 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 CEP41Q9BYV8 373 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 SLC24A3Q9HC58 644 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 VANGL2Q9ULK5 521 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 NRCAMQ92823 1304 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 TIMM44O43615 452 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 FBXO21O94952 628 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 FESP07332 822 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 CYP2C9P11712 490 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 SMPD1P17405 629 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 SLC25A3Q00325 362 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 ITGA9Q13797 1035 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 ZNF618Q5T7W0 954 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 PGM2L1Q6PCE3 622 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 ZNF669Q96BR6 464 aaPredicted RBP19.63■□□□□ 0.73
PTBP1-220ENST00000627714 TRAPPC9Q96Q05 1148 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 TTC1Q99614 292 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 CASS4Q9NQ75 786 aa19.63■□□□□ 0.73
PTBP1-220ENST00000627714 ZNF236Q9UL36 1845 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 AP3B1O00203 1094 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 AHCYL1O43865 530 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 PTPN3P26045 913 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 HADHAP40939 763 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 CSE1LP55060 971 aaKnown RBP19.62■□□□□ 0.73
PTBP1-220ENST00000627714 STRA8Q7Z7C7 330 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 GSTCDQ8NEC7 633 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 OR52K1Q8NGK4 314 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 FCRL3Q96P31 734 aaPredicted RBP19.62■□□□□ 0.73
PTBP1-220ENST00000627714 TSC22D3Q99576 134 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 TRHDEQ9UKU6 1024 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 TSC2P49815 1807 aa19.62■□□□□ 0.73
PTBP1-220ENST00000627714 CCDC189A1A4V9 331 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 BAG2O95816 211 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 APOA4P06727 396 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 ADRA1BP35368 520 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 ZNF135P52742 658 aaPredicted RBP19.61■□□□□ 0.73
PTBP1-220ENST00000627714 HK2P52789 917 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 CACNA2D1P54289 1103 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 PPIDQ08752 370 aaKnown RBP19.61■□□□□ 0.73
PTBP1-220ENST00000627714 CFAP157Q5JU67 520 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 IFT43Q96FT9 208 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 CDH19Q9H159 772 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 CDHR5Q9HBB8 845 aa19.61■□□□□ 0.73
PTBP1-220ENST00000627714 PIGVQ9NUD9 493 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms