RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 CTAGE3PQ8IX95 158 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 OTUD6BQ8N6M0 293 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 GRAMD1AQ96CP6 724 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 SLC39A13Q96H72 371 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 SPATA17Q96L03 361 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 FCRL2Q96LA5 508 aaPredicted RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 ELAC2Q9BQ52 826 aaKnown RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 OSER1Q9NX31 292 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 CLIC5Q9NZA1 410 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 FNIP2Q9P278 1114 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 MYO1CO00159 1063 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 PSMD3O43242 534 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 MSI1O43347 362 aaKnown RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 SNX3O60493 162 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 PQBP1O60828 265 aaKnown RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 OAS1P00973 400 aaKnown RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 SNRPAP09012 282 aaKnown RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 SRGAP2BP0DMP2 458 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 FOXN2P32314 431 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 SERPINB9P50453 376 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 HHATQ5VTY9 493 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 SDHAF4Q5VUM1 108 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 ANKRD33Q7Z3H0 272 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 TTC17Q96AE7 1141 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 MTBPQ96DY7 904 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 TEKT5Q96M29 485 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 GORASP1Q9BQQ3 440 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 SMYD2Q9NRG4 433 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 OLA1Q9NTK5 396 aaKnown RBP22.62■■□□□ 1.21
PNKP-220ENST00000627232 FGFR1OP2Q9NVK5 253 aa22.62■■□□□ 1.21
PNKP-220ENST00000627232 MICAL3Q7RTP6 2002 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 WDR27A2RRH5 827 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 MTMR11A4FU01 709 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 TBKBP1A7MCY6 615 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 WASH4PA8MWX3 477 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 CXorf49A8MYA2 514 aaPredicted RBP22.61■■□□□ 1.21
PNKP-220ENST00000627232 F5H423 210 aaPredicted RBP22.61■■□□□ 1.21
PNKP-220ENST00000627232 ZBTB24O43167 697 aaPredicted RBP22.61■■□□□ 1.21
PNKP-220ENST00000627232 CPB1P15086 417 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 MGAT1P26572 445 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 YWHAQP27348 245 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 NAB1Q13506 487 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 SLC1A5Q15758 541 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 PDK4Q16654 411 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 ARTNQ5T4W7 220 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 KCTD11Q693B1 232 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 ZNF449Q6P9G9 518 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 SH2D5Q6ZV89 423 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 ANKS3Q6ZW76 656 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 KLHDC8BQ8IXV7 354 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 LRRC43Q8N309 656 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 ATAD1Q8NBU5 361 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 ARNTL2Q8WYA1 636 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 PGLYRP2Q96PD5 576 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 GMIPQ9P107 970 aa22.61■■□□□ 1.21
PNKP-220ENST00000627232 KRT38O76015 456 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 HAPLN1P10915 354 aaPredicted RBP22.6■■□□□ 1.21
PNKP-220ENST00000627232 CD68P34810 354 aaPredicted RBP22.6■■□□□ 1.21
PNKP-220ENST00000627232 MLLT6P55198 1093 aaPredicted RBP22.6■■□□□ 1.21
PNKP-220ENST00000627232 USP46P62068 366 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 ZBTB17Q13105 803 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 LVRNQ6Q4G3 990 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 CCDC121Q6ZUS5 278 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 MARK2Q7KZI7 788 aaKnown RBP22.6■■□□□ 1.21
PNKP-220ENST00000627232 LRRC49Q8IUZ0 686 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 ARHGAP12Q8IWW6 846 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 ZSCAN18Q8TBC5 510 aaPredicted RBP22.6■■□□□ 1.21
PNKP-220ENST00000627232 DEPDC1BQ8WUY9 529 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 APOPT1Q96IL0 206 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 PAIP2Q9BPZ3 127 aaKnown RBP22.6■■□□□ 1.21
PNKP-220ENST00000627232 HIPK3Q9H422 1215 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 CASS4Q9NQ75 786 aa22.6■■□□□ 1.21
PNKP-220ENST00000627232 TRIM49D1C9J1S8 452 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 ALADP13716 330 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 CNTFP26441 200 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 TBX4P57082 545 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 SESN2P58004 480 aaPredicted RBP22.59■■□□□ 1.21
PNKP-220ENST00000627232 PRPSAP1Q14558 356 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 MTFR1Q15390 333 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 SEPT7Q16181 437 aaKnown RBP22.59■■□□□ 1.21
PNKP-220ENST00000627232 AFMIDQ63HM1 303 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 CASC4Q6P4E1 433 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 TRMT10BQ6PF06 316 aaKnown RBP22.59■■□□□ 1.21
PNKP-220ENST00000627232 FBXO32Q969P5 355 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 OXNAD1Q96HP4 312 aaPredicted RBP22.59■■□□□ 1.21
PNKP-220ENST00000627232 SCLYQ96I15 445 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 CELF6Q96J87 481 aaKnown RBP22.59■■□□□ 1.21
PNKP-220ENST00000627232 SERAC1Q96JX3 654 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 TTPALQ9BTX7 342 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 TLR8Q9NR97 1041 aaKnown RBP22.59■■□□□ 1.21
PNKP-220ENST00000627232 USP15Q9Y4E8 981 aaPredicted RBP22.59■■□□□ 1.21
PNKP-220ENST00000627232 HS3ST4Q9Y661 456 aa22.59■■□□□ 1.21
PNKP-220ENST00000627232 E9PAM4 449 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 AP3B1O00203 1094 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 CACNG3O60359 315 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 CSH1P0DML2 217 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 CSH2P0DML3 217 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 CCL5P13501 91 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 NFKB1P19838 968 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 TUBP50607 506 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms