RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 KYAT3Q6YP21 454 aaKnown RBP18.1■□□□□ 0.49
PCF11-207ENST00000624931 PAQR9Q6ZVX9 377 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 UNC45BQ8IWX7 931 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 SCUBE1Q8IWY4 988 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 OR10T2Q8NGX3 314 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 BCL7CQ8WUZ0 217 aaPredicted RBP18.1■□□□□ 0.49
PCF11-207ENST00000624931 PIWIL1Q96J94 861 aaKnown RBP18.1■□□□□ 0.49
PCF11-207ENST00000624931 SERAC1Q96JX3 654 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 TNIP3Q96KP6 325 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 B3GALT6Q96L58 329 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 B3GNT5Q9BYG0 378 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 RHOBTB2Q9BYZ6 727 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 FAM96AQ9H5X1 160 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 HESX1Q9UBX0 185 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 CHMP2BQ9UQN3 213 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 PLLPQ9Y342 182 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 NUMBLQ9Y6R0 609 aa18.1■□□□□ 0.49
PCF11-207ENST00000624931 VWA8A3KMH1 1905 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 ANKRD33BA6NCL7 494 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 B2RBV5 119 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 TM7SF2O76062 418 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 CYP11A1P05108 521 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 LHX1P48742 406 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 SERPINB9P50453 376 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 YWHAGP61981 247 aaKnown RBP eCLIP18.09■□□□□ 0.49
PCF11-207ENST00000624931 DYNLT1P63172 113 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 PTPRSQ13332 1948 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 DYNC1I2Q13409 638 aaKnown RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 THOC5Q13769 683 aaKnown RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 KCNJ11Q14654 390 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 NOMO1Q15155 1222 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 STILQ15468 1287 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 TMCO4Q5TGY1 634 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 ARCQ7LC44 396 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 CRLF3Q8IUI8 442 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 JOSD2Q8TAC2 188 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 NRG4Q8WWG1 115 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 E2F7Q96AV8 911 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 SRPK1Q96SB4 655 aaKnown RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 MED10Q9BTT4 135 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 MIS12Q9H081 205 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 VCX3BQ9H321 246 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 ZWILCHQ9H900 591 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 TMLHEQ9NVH6 421 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 ASNSD1Q9NWL6 643 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 PCDHB8Q9UN66 801 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 TMEM189-UBE2V1I3L0A0 370 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 HOXA2O43364 376 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 KRT38O76015 456 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 PRKCHP24723 683 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 RFC1P35251 1148 aaPredicted RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 CACNA2D1P54289 1103 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 RPL26P61254 145 aaKnown RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 KBTBD12Q3ZCT8 623 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 STXBP5Q5T5C0 1151 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 OVOS1Q6IE37 1185 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 DARS2Q6PI48 645 aaKnown RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 FAM183BPQ6ZVS7 135 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 ZC3H18Q86VM9 953 aaKnown RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 METTL23Q86XA0 190 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 MYLK4Q86YV6 388 aaPredicted RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 FBXO6Q9NRD1 293 aaPredicted RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 METTL5Q9NRN9 209 aaKnown RBP18.09■□□□□ 0.49
PCF11-207ENST00000624931 SIRPGQ9P1W8 387 aa18.09■□□□□ 0.49
PCF11-207ENST00000624931 TADA2AO75478 443 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 BEST1O76090 585 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 FAM163BP0C2L3 166 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 OR4Q2P0C623 313 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 CNTFP26441 200 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 MAGEA6P43360 314 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 BCAT1P54687 386 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 XIAPP98170 497 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 BST2Q10589 180 aaKnown RBP18.08■□□□□ 0.48
PCF11-207ENST00000624931 WASHC5Q12768 1159 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 EP400NLQ6ZTU2 488 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 LRRC43Q8N309 656 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 FAM71DQ8N9W8 422 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 ANKRD52Q8NB46 1076 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 SLC35F5Q8WV83 523 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 WDR60Q8WVS4 1066 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 MYLPFQ96A32 169 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 RTP4Q96DX8 246 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 GBP5Q96PP8 586 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 KLF6Q99612 283 aaPredicted RBP18.08■□□□□ 0.48
PCF11-207ENST00000624931 HNRNPABQ99729 332 aaKnown RBP18.08■□□□□ 0.48
PCF11-207ENST00000624931 KRT82Q9NSB4 513 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 TMEM30AQ9NV96 361 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 CDH9Q9ULB4 789 aa18.08■□□□□ 0.48
PCF11-207ENST00000624931 TCRBV7S3A2A0A539 114 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 ENDOD1O94919 500 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 TRUB2O95900 331 aaKnown RBP18.07■□□□□ 0.48
PCF11-207ENST00000624931 SERPINA6P08185 405 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 ACTR3P61158 418 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 WDR5P61964 334 aaKnown RBP18.07■□□□□ 0.48
PCF11-207ENST00000624931 GAD2Q05329 585 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 OR6B2Q6IFH4 312 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 OTOP2Q7RTS6 562 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 FAM35AQ86V20 835 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 MAP7D3Q8IWC1 876 aa18.07■□□□□ 0.48
PCF11-207ENST00000624931 TMEM199Q8N511 208 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms