RNA–Protein interactions for RNA: ENST00000622892.4

PSME3-217, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-217ENST00000622892 LAMTOR4Q0VGL1 99 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 MYBPC3Q14896 1274 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 MYLK3Q32MK0 819 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 XRRA1Q6P2D8 792 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 NAPRTQ6XQN6 538 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 GPR142Q7Z601 462 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 CDHR1Q96JP9 859 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 LRGUKQ96M69 825 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 LGMNQ99538 433 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 AP4B1Q9Y6B7 739 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 LCTP09848 1927 aa13.33□□□□□ -0.28
PSME3-217ENST00000622892 BCLAF3A2AJT9 711 aaKnown RBP13.32□□□□□ -0.28
PSME3-217ENST00000622892 CRTAMO95727 393 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 HSPA4LO95757 839 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 DLG2Q15700 870 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 FAM156AQ8NDB6 213 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 CEP70Q8NHQ1 597 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 LRRC39Q96DD0 335 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 FRMD8Q9BZ67 464 aaPredicted RBP13.32□□□□□ -0.28
PSME3-217ENST00000622892 HEMK1Q9Y5R4 338 aaPredicted RBP13.32□□□□□ -0.28
PSME3-217ENST00000622892 PEX1O43933 1283 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 CPA3P15088 417 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 XRCC1P18887 633 aaPredicted RBP13.32□□□□□ -0.28
PSME3-217ENST00000622892 MAGEA3P43357 314 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 THOP1P52888 689 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 HTRA3P83110 453 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 PDK1Q15118 436 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
PSME3-217ENST00000622892 SNX32Q86XE0 403 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 MCUQ8NE86 351 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 ABTB1Q969K4 478 aaPredicted RBP13.32□□□□□ -0.28
PSME3-217ENST00000622892 RTP4Q96DX8 246 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 MARK4Q96L34 752 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 CAB39LQ9H9S4 337 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 FAM49BQ9NUQ9 324 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 SEPT10Q9P0V9 454 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 TXNDC16Q9P2K2 825 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 TSPAN16Q9UKR8 245 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 SOCS7O14512 581 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 RGS2P41220 211 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 PHKA2P46019 1235 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 CCNA1P78396 465 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 CCL14Q16627 93 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 BOLA3Q53S33 107 aa13.32□□□□□ -0.28
PSME3-217ENST00000622892 PTAR1Q7Z6K3 402 aaPredicted RBP13.32□□□□□ -0.28
PSME3-217ENST00000622892 CILPO75339 1184 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 FBXO21O94952 628 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 ENO3P13929 434 aaPredicted RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 EPHA3P29320 983 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 NDST1P52848 882 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 MYBPC1Q00872 1141 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 ACAP1Q15027 740 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 PMF1Q6P1K2 205 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 B3GNT6Q6ZMB0 384 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 TIFABQ6ZNK6 161 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 LCA5Q86VQ0 697 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 KCNK16Q96T55 309 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 LPIN3Q9BQK8 851 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 NRBP2Q9NSY0 501 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 DCDC2Q9UHG0 476 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 PSMD13Q9UNM6 376 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 GNEQ9Y223 722 aaKnown RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 HES2Q9Y543 173 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 LACTBL1A8MY62 500 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 H3BSA7 217 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 USP12O75317 370 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 ATP5BP06576 529 aaKnown RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 TGM2P21980 687 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 SDC4P31431 198 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 CDKL1Q00532 357 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 MS4A2Q01362 244 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 FLOT2Q14254 428 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 CYTH1Q15438 398 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 ATF7IP2Q5U623 682 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 TMEM198Q66K66 360 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 HEATR6Q6AI08 1181 aaKnown RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 LILRA2Q8N149 483 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 PYROXD2Q8N2H3 581 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 APBB2Q92870 758 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 BTBD9Q96Q07 612 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 MRPL1Q9BYD6 325 aaKnown RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 RPF1Q9H9Y2 349 aaKnown RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 LIN28AQ9H9Z2 209 aaKnown RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 DNAAF2Q9NVR5 837 aaKnown RBP13.31□□□□□ -0.28
PSME3-217ENST00000622892 DNAJC28Q9NX36 388 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 TMCO1Q9UM00 188 aa13.31□□□□□ -0.28
PSME3-217ENST00000622892 CASQ2O14958 399 aaPredicted RBP13.3□□□□□ -0.28
PSME3-217ENST00000622892 CHRNGP07510 517 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 SAT1P21673 171 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 HDAC4P56524 1084 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 XIAPP98170 497 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 TMEM62Q0P6H9 643 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 PDK2Q15119 407 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 SLC9A4Q6AI14 798 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 AMIGO2Q86SJ2 522 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 NPLOC4Q8TAT6 608 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 ZSCAN18Q8TBC5 510 aaPredicted RBP13.3□□□□□ -0.28
PSME3-217ENST00000622892 AFG1LQ8WV93 481 aa13.3□□□□□ -0.28
PSME3-217ENST00000622892 CDKL2Q92772 493 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms