RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GABRG2P18507 467 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 PRKCHP24723 683 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 CSKP41240 450 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 NUMBP49757 651 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 ZNF143P52747 638 aaPredicted RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 CDH4P55283 916 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 RPL7AP62424 266 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 BYSLQ13895 437 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 ELF2Q15723 593 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 TSR1Q2NL82 804 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 KIAA1324Q6UXG2 1013 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 BNIPLQ7Z465 357 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 C14orf80Q86SX3 495 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 C11orf74Q86VG3 221 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 DNAAF5Q86Y56 855 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 RLN3Q8WXF3 142 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 C1orf74Q96LT6 269 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 TRIM5Q9C035 493 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 ZNHIT6Q9NWK9 470 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 MYO1AQ9UBC5 1043 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 CNOT8Q9UFF9 292 aaKnown RBP14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 WDR87Q6ZQQ6 2873 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 MYO15AQ9UKN7 3530 aa14.4□□□□□ -0.1
PCDHGC3-208ENST00000622836 TCRBV5S1A1TA0A578 114 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 E9PAM4 449 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 I6L893 689 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 RHOBTB1O94844 696 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 RHOCP08134 193 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 PLEKP08567 350 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 MYBL1P10243 752 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 NDUFV2P19404 249 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 PSMA2P25787 234 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 NNMTP40261 264 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 IRAK1P51617 712 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 MAMLD1Q13495 774 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 SLC12A1Q13621 1099 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 ENPP2Q13822 863 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 PLEKHG6Q3KR16 790 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 RAB6CQ53S08 254 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 HGSNATQ68CP4 663 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 TFAP2DQ7Z6R9 452 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 KBTBD6Q86V97 674 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 VSTM4Q8IW00 320 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 APCDD1Q8J025 514 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 DCLK2Q8N568 766 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 FAM160A2Q8N612 972 aaPredicted RBP14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 ZNF366Q8N895 744 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 OLIG1Q8TAK6 271 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 TTC17Q96AE7 1141 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 LMLNQ96KR4 655 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 CNPY3Q9BT09 278 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 RAB6CQ9H0N0 254 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 MUC3BQ9H195 1237 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 MPP6Q9NZW5 540 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 INTS6Q9UL03 887 aaKnown RBP14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 SCINQ9Y6U3 715 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 SDK1Q7Z5N4 2213 aa14.39□□□□□ -0.11
PCDHGC3-208ENST00000622836 ZNF217O75362 1048 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 CNTN5O94779 1100 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 RETP07949 1114 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 ACADMP11310 421 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 MZF1P28698 734 aaPredicted RBP14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 ADRA1BP35368 520 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 HDAC4P56524 1084 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 ECT2LQ008S8 904 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 PTPRNQ16849 979 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 PLK5Q496M5 336 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 ALFQ53S48 1182 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 C6orf118Q5T5N4 469 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 PLEKHA7Q6IQ23 1121 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 CXorf57Q6NSI4 855 aaKnown RBP14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 RWDD4Q6NW29 188 aaKnown RBP14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 TMC6Q7Z403 805 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 SLFN11Q7Z7L1 901 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 CACUL1Q86Y37 369 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 OR8K1Q8NGG5 319 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 CENPIQ92674 756 aaPredicted RBP14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 MRGPRX1Q96LB2 322 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 SLC6A17Q9H1V8 727 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 TMEM245Q9H330 911 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 DEF6Q9H4E7 631 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 PRDM16Q9HAZ2 1276 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 MRPL47Q9HD33 250 aaKnown RBP14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 OR12D3Q9UGF7 316 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 SUN2Q9UH99 717 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 ERVW-1Q9UQF0 538 aa14.38□□□□□ -0.11
PCDHGC3-208ENST00000622836 OTOGLQ3ZCN5 2332 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 SRPRAP08240 638 aaKnown RBP14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 OR1E1P30953 314 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 P2RY2P41231 377 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 CTSOP43234 321 aaPredicted RBP14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 SULT2A1Q06520 285 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 C5orf22Q49AR2 442 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 EFHC2Q5JST6 749 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 CCDC122Q5T0U0 273 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 TMPRSS6Q8IU80 811 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 CCDC185Q8N715 623 aa14.37□□□□□ -0.11
PCDHGC3-208ENST00000622836 OR2T3Q8NH03 318 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms