RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

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Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 TMEM248Q9NWD8 314 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 DTLQ9NZJ0 730 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 DNPEPQ9ULA0 475 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 SZT2Q5T011 3432 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 MYOFQ9NZM1 2061 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 TYW5A2RUC4 315 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 WASH4PA8MWX3 477 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 KCNA5P22460 613 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 COILP38432 576 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 BYSLQ13895 437 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 TEX35Q5T0J7 233 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 TTC27Q6P3X3 843 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 CCDC137Q6PK04 289 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 BZW1Q7L1Q6 419 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 ZC3H18Q86VM9 953 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 HJURPQ8NCD3 748 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 SLC35B2Q8TB61 432 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 RSPRY1Q96DX4 576 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 CELF6Q96J87 481 aaKnown RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 UBE2ZQ9H832 354 aaPredicted RBP18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 DONSONQ9NYP3 566 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 TBC1D14Q9P2M4 693 aa18.32■□□□□ 0.52
PTCHD3-202ENST00000622555 SHROOM3Q8TF72 1996 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 H7C0C1 242 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 ATP5OP48047 213 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 KCNJ1P48048 391 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 FNTAP49354 379 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 CDH4P55283 916 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 TTC39BQ5VTQ0 682 aaPredicted RBP18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 CCDC105Q8IYK2 499 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 LZTR1Q8N653 840 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 SUSD6Q92537 303 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 TMA16Q96EY4 203 aaKnown RBP18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 CCDC114Q96M63 670 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 LRRC3BQ96PB8 259 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 TRPV4Q9HBA0 871 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 NDFIP2Q9NV92 336 aa18.31■□□□□ 0.52
PTCHD3-202ENST00000622555 GFRA2O00451 464 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 SLC9A3R1O14745 358 aaPredicted RBP18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 TBL1XO60907 577 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 RBP3P10745 1247 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 TUBB4BP68371 445 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 DRICH1Q6PGQ1 229 aaPredicted RBP18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 FBXO38Q6PIJ6 1188 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 TPGS1Q6ZTW0 290 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 TP53INP2Q8IXH6 220 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 ST13P5Q8NFI4 369 aaPredicted RBP18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 BPIFB1Q8TDL5 484 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 DDI1Q8WTU0 396 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 BHMTQ93088 406 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 NKD2Q969F2 451 aaPredicted RBP18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 RUNDC3BQ96NL0 473 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 KLC2Q9H0B6 622 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 ZFP14Q9HCL3 533 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 AMACRQ9UHK6 382 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 ZNF148Q9UQR1 794 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 RAD54BQ9Y620 910 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 WNT6Q9Y6F9 365 aa18.3■□□□□ 0.52
PTCHD3-202ENST00000622555 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 A0A1B0GVM2 712 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 TCAF2A6NFQ2 919 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 HEPACAM2A8MVW5 462 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 CLDN11O75508 207 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 LAMP2P13473 410 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 FCARP24071 287 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 OR1E1P30953 314 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 MAPKAPK2P49137 400 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 MRPS25P82663 173 aaKnown RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 PDK1Q15118 436 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 C8orf74Q6P047 294 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 DARS2Q6PI48 645 aaKnown RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 B4GALNT4Q76KP1 1039 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 CHST9Q7L1S5 443 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 CCDC26Q8TAB7 109 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 OTUB2Q96DC9 234 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 OLFM3Q96PB7 478 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 LINC00597Q9H2U6 94 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 RETREG1Q9H6L5 497 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 OBP2AQ9NY56 170 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 ZNF212Q9UDV6 495 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 PCYOX1Q9UHG3 505 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 NYNRINQ9P2P1 1898 aaKnown RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 GRXCR2A6NFK2 248 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 DFFAO00273 331 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 CYBBP04839 570 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 DR1Q01658 176 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 ZNF177Q13360 481 aaPredicted RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 XRCC4Q13426 336 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 OASLQ15646 514 aaKnown RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 MPPE1Q53F39 396 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 TANGO2Q6ICL3 276 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 UMODL1-AS1Q8N2C9 162 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 GPR161Q8N6U8 529 aaKnown RBP18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 KIAA1958Q8N8K9 716 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 ATL2Q8NHH9 583 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 LRRN4Q8WUT4 740 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 TMEM121Q9BTD3 319 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 LRRC1Q9BTT6 524 aa18.29■□□□□ 0.52
PTCHD3-202ENST00000622555 C10orf88Q9H8K7 445 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms