RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 LRRC38Q5VT99 294 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 GRAMD4Q6IC98 578 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 FSTL4Q6MZW2 842 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 CXorf57Q6NSI4 855 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 AADACL2Q6P093 401 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 MFSD7Q6UXD7 560 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 RFX8Q6ZV50 586 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 CHST9Q7L1S5 443 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 NLRP14Q86W24 1093 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 MFN1Q8IWA4 741 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 KCTD6Q8NC69 237 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 FIBINQ8TAL6 211 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 FAM3CQ92520 227 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 ALG3Q92685 438 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 LMLNQ96KR4 655 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 CSPG4P5Q96PW8 444 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 XPO6Q96QU8 1125 aaKnown RBP11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 PNKPQ96T60 521 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 EPAS1Q99814 870 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 P2RY13Q9BPV8 354 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 CALN1Q9BXU9 219 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 FOXQ1Q9C009 403 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 EPHX3Q9H6B9 360 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 ARHGEF4Q9NR80 690 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 ABCB8Q9NUT2 735 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 ETNK2Q9NVF9 386 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 DNAI1Q9UI46 699 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 PCDHA3Q9Y5H8 950 aa11.25□□□□□ -0.61
POLR2J3-221ENST00000621093 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 PRRT4C9JH25 899 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 H3BRJ5 948 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 CLDN11O75508 207 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 GLULP15104 373 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 RHOQP17081 205 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 ERCC2P18074 760 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 TARSP26639 723 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 CSKP41240 450 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 PEX5P50542 639 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 STARD6P59095 220 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 PRKCQQ04759 706 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 SIGLEC14Q08ET2 396 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 ZNF177Q13360 481 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 CDH18Q13634 790 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 DPYSQ14117 519 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 ZNF569Q5MCW4 686 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 ACBD5Q5T8D3 534 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 MEI1Q5TIA1 1274 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 TTC39BQ5VTQ0 682 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 RNF219Q5W0B1 726 aaPredicted RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 TMEM215Q68D42 235 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 TRIM67Q6ZTA4 783 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 TP53INP2Q8IXH6 220 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 APCDD1Q8J025 514 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 SLC35F6Q8N357 371 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 OR7D4Q8NG98 312 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 PCDH19Q8TAB3 1148 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 HERPUD2Q9BSE4 406 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 NOL6Q9H6R4 1146 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 TBC1D17Q9HA65 648 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 ZDHHC4Q9NPG8 344 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 RBM12Q9NTZ6 932 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 TMEM248Q9NWD8 314 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 DDX56Q9NY93 547 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 DEC1Q9P2X7 70 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 GGA2Q9UJY4 613 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 INTS6Q9UL03 887 aaKnown RBP11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 HCN2Q9UL51 889 aa11.24□□□□□ -0.61
POLR2J3-221ENST00000621093 A0A0D9SEW6 157 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 WASH4PA8MWX3 477 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 K7EQS6 105 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 DCLK1O15075 740 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 DAPK3O43293 454 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 KAT7O95251 611 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 APODP05090 189 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 RHOCP08134 193 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 PABPC1P11940 636 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 KRT10P13645 584 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 OR1E1P30953 314 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 ACVRL1P37023 503 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 ARL4AP40617 200 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 HCAR3P49019 387 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 SEC13P55735 322 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 ZNF211Q13398 564 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 UBXN2BQ14CS0 331 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 PDK2Q15119 407 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 FUT11Q495W5 492 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 ANKRD20A8PQ5CZ79 823 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 TMEM196Q5HYL7 178 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 EMC10Q5UCC4 262 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 DCAF12L1Q5VU92 463 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 ZNF852Q6ZMS4 543 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 SPOCD1Q6ZMY3 1216 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 KIAA0907Q7Z7F0 614 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 KATNAL2Q8IYT4 538 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 ZNF687Q8N1G0 1237 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 CCDC33Q8N5R6 958 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 NPWQ8N729 165 aa11.23□□□□□ -0.61
POLR2J3-221ENST00000621093 PQLC3Q8N755 202 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms