RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 NUDT5Q9UKK9 219 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SUPT7LO94864 414 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 NFICP08651 508 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 THRBP10828 461 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 NPR2P20594 1047 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GPD1P21695 349 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ALDH3A2P51648 485 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 AP1S1P61966 158 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 DDR1Q08345 913 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ALX1Q15699 326 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ALFQ53S48 1182 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GRTP1Q5TC63 336 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF589Q86UQ0 364 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF669Q96BR6 464 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ERMAPQ96PL5 475 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GSDMCQ9BYG8 508 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 SIK2Q9H0K1 926 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ZCWPW1Q9H0M4 648 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 CAPN10Q9HC96 672 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ZSWIM5Q9P217 1185 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PCDHA6Q9UN73 950 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 GTF2A1LQ9UNN4 478 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PCDHA8Q9Y5H6 950 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 DIP2CQ9Y2E4 1556 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PRKAB2O43741 272 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 NDUFS2O75306 463 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 CCNE2O96020 404 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ACADMP11310 421 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 CPA3P15088 417 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 EPB42P16452 691 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ETFBP38117 255 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 FAM187BQ17R55 369 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ARSJQ5FYB0 599 aaPredicted RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 TFDP3Q5H9I0 405 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PPM1LQ5SGD2 360 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PAPD7Q5XG87 772 aaKnown RBP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PLET1Q6UQ28 207 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PROSER1Q86XN7 944 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ITFG1Q8TB96 612 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF518BQ9C0D4 1074 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 BARHL2Q9NY43 387 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 KIAA1257Q9ULG3 409 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PLCL2Q9UPR0 1127 aa7.31□□□□□ -1.24
COLCA1-205ENST00000620864 PDHBP11177 359 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 KPNA1P52294 538 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PAN2Q504Q3 1202 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SPATA2LQ8IUW3 424 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 GPALPP1Q8IXQ4 340 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TMC2Q8TDI7 906 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF512Q96ME7 567 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ZSWIM1Q9BR11 485 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 STARD7Q9NQZ5 370 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ACOT9Q9Y305 439 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TULP4Q9NRJ4 1543 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 FLT1P17948 1338 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 MYPNQ86TC9 1320 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ARPC4-TTLL3A0A0A6YYG9 625 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 HS6ST1O60243 411 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CRTAMO95727 393 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 IFNA16P05015 189 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 RBP3P10745 1247 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SRP54P61011 504 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 OLFML2AQ68BL7 652 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ULK3Q6PHR2 472 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CHPFQ8IZ52 775 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 FEZF2Q8TBJ5 459 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 LRRC20Q8TCA0 184 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 AIFM2Q9BRQ8 373 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CAB39LQ9H9S4 337 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TMEM8AQ9HCN3 771 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CHORDC1Q9UHD1 332 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 V9GYQ6 96 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 LOC110117498-PIK3R3F6TDL0 507 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF185O15231 689 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 OR6B1O95007 311 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 RTN3O95197 1032 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 TXNP10599 105 aaKnown RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 AKR1B1P15121 316 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 SDC2P34741 201 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CCNG1P51959 295 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PTSQ03393 145 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CAMK2GQ13555 558 aaPredicted RBP7.3□□□□□ -1.24
COLCA1-205ENST00000620864 DGKDQ16760 1214 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 HKDC1Q2TB90 917 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 FUT11Q495W5 492 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 MROH9Q5TGP6 573 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 FUKQ8N0W3 1084 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 OR52L1Q8NGH7 329 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PIK3R3Q92569 461 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CRELD1Q96HD1 420 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 NEDD4LQ96PU5 975 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 GPR63Q9BZJ6 419 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 PRKD2Q9BZL6 878 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ROGDIQ9GZN7 287 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 DNAJC16Q9Y2G8 782 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CNTNAP4Q9C0A0 1308 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CPDO75976 1380 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 ZNF806P0C7X5 589 aa7.3□□□□□ -1.24
COLCA1-205ENST00000620864 CCNCP24863 283 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms