RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 AOC1P19801 751 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 STT3AP46977 705 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 THOP1P52888 689 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 MAPK10P53779 464 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 CDH15P55291 814 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 SH3BGRP55822 239 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 TNFAIP2Q03169 654 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 NME3Q13232 169 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 MXD4Q14582 209 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 LAYNQ6UX15 382 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 FBXO16Q8IX29 292 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 TMEM192Q8IY95 271 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 BHLHE22Q8NFJ8 381 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 EME1Q96AY2 570 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 SIK2Q9H0K1 926 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 UPF3AQ9H1J1 476 aaKnown RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 PAK5Q9P286 719 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 WARS2Q9UGM6 360 aaKnown RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 TSR3Q9UJK0 312 aaKnown RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 MFHAS1Q9Y4C4 1052 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 SBF2Q86WG5 1849 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 TCRBV5S1A1TA0A578 114 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 KLF11O14901 512 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 BNIP3LO60238 219 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 LYPLA2O95372 231 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 MT-CO1P00395 513 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 FGF3P11487 239 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 FUT4P22083 530 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 EIF4BP23588 611 aaKnown RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 CRHR1P34998 444 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 CNTN2Q02246 1040 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 ITPRIPL1Q6GPH6 555 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 AAGABQ6PD74 315 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 CYP2R1Q6VVX0 501 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 SPATA6LQ8N4H0 392 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 PQLC3Q8N755 202 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 ZNF512Q96ME7 567 aaPredicted RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 CATSPER2Q96P56 530 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 LGMNQ99538 433 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 APOL2Q9BQE5 337 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 KATNAL1Q9BW62 490 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 B3GNT5Q9BYG0 378 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 FETUBQ9UGM5 382 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 KCNH4Q9UQ05 1017 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 HES2Q9Y543 173 aa7.12□□□□□ -1.27
NEDD9-216ENST00000620854 MRPL42Q9Y6G3 142 aaKnown RBP7.12□□□□□ -1.27
NEDD9-216ENST00000620854 A0A0J9YVX5 310 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SMIM31A0A1B0GVY4 71 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SNNO75324 88 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CHRNGP07510 517 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CDK4P11802 303 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TFE3P19532 575 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 MGAT1P26572 445 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 FKBP1BP68106 108 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CDKL1Q00532 357 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 MS4A2Q01362 244 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CYLC2Q14093 348 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 NOMO1Q15155 1222 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 GNASQ5JWF2 1037 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 RARS2Q5T160 578 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 FAM219BQ5XKK7 198 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 KYAT3Q6YP21 454 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 XYLT1Q86Y38 959 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PLD6Q8N2A8 252 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PCDH20Q8N6Y1 951 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PRICKLE1Q96MT3 831 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CCT7Q99832 543 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 C17orf75Q9HAS0 396 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 C20orf96Q9NUD7 363 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 LRFN2Q9ULH4 789 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TMCO1Q9UM00 188 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 ANGPTL3Q9Y5C1 460 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 APOL1O14791 398 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 ALDH1A1P00352 501 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PRKCBP05771 671 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SMIM18P0DKX4 95 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 ATXN8OSP0DMR3 200 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TGFB3P10600 412 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PTGER2P43116 358 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PSMD7P51665 324 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 HPCAP84074 193 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SP2Q02086 613 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 KLF10Q13118 480 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 C16orf72Q14CZ0 275 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 DGKDQ16760 1214 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 MBLAC2Q68D91 279 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 MYO1HQ8N1T3 1032 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CMASQ8NFW8 434 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 RCN3Q96D15 328 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SGF29Q96ES7 293 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 VPS39Q96JC1 886 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 RNF157Q96PX1 679 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 EBNA1BP2Q99848 306 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 XPNPEP3Q9NQH7 507 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 RPS6KL1Q9Y6S9 549 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 H3BNX3 289 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 BOLA2-SMG1P6H3BVE0 249 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 B4GALT5O43286 388 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PLIN3O60664 434 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TRMUO75648 421 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms