RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 TRIM45Q9H8W5 580 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 EIF2AK4Q9P2K8 1649 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 AP2S1P53680 142 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 DDX39BQ13838 428 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CLEC16AQ2KHT3 1053 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 FAM47CQ5HY64 1035 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 IDI2Q9BXS1 227 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 DDX4Q9NQI0 724 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CHST12Q9NRB3 414 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 FADS3Q9Y5Q0 445 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 KCNU1A8MYU2 1149 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 TEX46H3BTG2 121 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 K7ERI5 159 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 IL6P05231 212 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 GTF2H1P32780 548 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 KLF1Q13351 362 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 EMC1Q8N766 993 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 STARD8Q92502 1023 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 BAP1Q92560 729 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 TNFRSF25Q93038 417 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ISOC1Q96CN7 298 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 OMDQ99983 421 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 NDFIP2Q9NV92 336 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 U3KQV3 271 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SDR42E2A6NKP2 422 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SMAD9O15198 467 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CYP2C8P10632 490 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PBX1P40424 430 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MILR1Q7Z6M3 343 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 GALNT12Q8IXK2 581 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 DSELQ8IZU8 1212 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF614Q8N883 585 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PCNPQ8WW12 178 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 RELTQ969Z4 430 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ASIC4Q96FT7 647 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CERS2Q96G23 380 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PPP1R10Q96QC0 940 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 EGFL8Q99944 293 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 INO80BQ9C086 356 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 WDR12Q9GZL7 423 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ADAMTS6Q9UKP5 1117 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 KDM5AP29375 1690 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MEN1O00255 615 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 HNRNPLP14866 589 aaKnown RBP eCLIP5.13□□□□□ -1.597e-7■■■■■ 31.3
VPS13D-214ENST00000620676 RFC4P35249 363 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 NXNL1Q96CM4 212 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 VPS35Q96QK1 796 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF556Q9HAH1 456 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 GPRC5CQ9NQ84 441 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 POLR3BQ9NW08 1133 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 DUSP12Q9UNI6 340 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 BTRCQ9Y297 605 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 FAM172BPA6NC97 362 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 H3BUI4 141 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PRKCBP05771 671 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CETPP11597 493 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MSLNQ13421 630 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 KLHL12Q53G59 568 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 C8orf59Q8N0T1 100 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 TMC2Q8TDI7 906 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 KAT5Q92993 513 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PAQR5Q9NXK6 330 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 KLHL3Q9UH77 587 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SLC13A4Q9UKG4 626 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SLC30A1Q9Y6M5 507 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SYNJ2O15056 1496 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF536O15090 1300 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 EFCAB10A6NFE3 127 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ADGRE1Q14246 886 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 EPHA7Q15375 998 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ANKRD22Q5VYY1 191 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ITFG1Q8TB96 612 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ING5Q8WYH8 240 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PLA2R1Q13018 1463 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 USP42Q9H9J4 1324 aaKnown RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 OR6C70A6NIJ9 312 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 H3BM21 787 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CEBPGP53567 150 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CHRNB3Q05901 458 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 AMHR2Q16671 573 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 RFX4Q33E94 735 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PPP1R26Q5T8A7 1209 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 TP53INP1Q96A56 240 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 TMEM143Q96AN5 459 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MAGED4Q96JG8 741 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ZNF560Q96MR9 790 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 CHCHD6Q9BRQ6 235 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 ING4Q9UNL4 249 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 EIF3FO00303 357 aaPredicted RBP5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MSH3P20585 1137 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PHKA2P46019 1235 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 SFRP1Q8N474 314 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 JADE3Q92613 823 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 MCUBQ9NWR8 336 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 A0A1W2PPW3 197 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 RGL2O15211 777 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 HOXB7P09629 217 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PPP3CCP48454 512 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 OXCT1P55809 520 aa5.13□□□□□ -1.59
VPS13D-214ENST00000620676 PKN1Q16512 942 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms