RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 CHMP2BQ9UQN3 213 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 YIPF1Q9Y548 306 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 PCDHB12Q9Y5F1 795 aa13.05□□□□□ -0.32
TNFAIP3-209ENST00000619035 EXOC1LA0A1B0GW35 172 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 NCAM2O15394 837 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 ABLIM3O94929 683 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 GJB5O95377 273 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 MX2P20592 715 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 GPX6P59796 221 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 MPP2Q14168 576 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 TRIP4Q15650 581 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 PPP1R21Q6ZMI0 780 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 SRRM1Q8IYB3 904 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZNF567Q8N184 647 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 FIBCD1Q8N539 461 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 OVCA2Q8WZ82 227 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 TTLL2Q9BWV7 592 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 CATSPERBQ9H7T0 1116 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 INTS9Q9NV88 658 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 KLHL8Q9P2G9 620 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 RRP15Q9Y3B9 282 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 CLUHO75153 1309 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 A0A087WUV0 522 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 TMEM120BA0PK00 339 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 EBAG9O00559 213 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 FGF10O15520 208 aaPredicted RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 FGF18O76093 207 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 FAM107AO95990 144 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 SPATA31D3P0C874 917 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 ELF1P32519 619 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 GARSP41250 739 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 GALNT2Q10471 571 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 WASHC5Q12768 1159 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 PLD1Q13393 1074 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 SPATA31D4Q6ZUB0 917 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 IGDCC3Q8IVU1 814 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 ATP6V0D2Q8N8Y2 350 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 PHOSPHO2Q8TCD6 241 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 CDK5RAP1Q96SZ6 601 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 CCDC77Q9BR77 488 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 UBE2OQ9C0C9 1292 aaKnown RBP13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 NDFIP2Q9NV92 336 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 FNIP2Q9P278 1114 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 INSL6Q9Y581 213 aa13.04□□□□□ -0.32
TNFAIP3-209ENST00000619035 PTPRSQ13332 1948 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 OPHN1O60890 802 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 SYN1P17600 705 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 PSMB4P28070 264 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 ELK3P41970 407 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 MLLT6P55198 1093 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 PPIDQ08752 370 aaKnown RBP13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 TWF1Q12792 350 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 RAB33AQ14088 237 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 STAT4Q14765 748 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 MS4A13Q5J8X5 152 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 MANEALQ5VSG8 457 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 RAP1GAP2Q684P5 730 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 TFAP2DQ7Z6R9 452 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 CROCCP2Q86T23 111 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 SRLQ86TD4 932 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 PALM2Q8IXS6 379 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 ATP11CQ8NB49 1132 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 PDZD8Q8NEN9 1154 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 BTN2A3PQ96KV6 586 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 STMN4Q9H169 189 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 KIF9Q9HAQ2 790 aa13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZMYND8Q9ULU4 1186 aaPredicted RBP13.03□□□□□ -0.32
TNFAIP3-209ENST00000619035 TEX28O15482 410 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 ABHD2P08910 425 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 CSH1P0DML2 217 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 CSH2P0DML3 217 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 PTPN3P26045 913 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 NRG1Q02297 640 aaPredicted RBP13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 SEMA5AQ13591 1074 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 VEPH1Q14D04 833 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 ARHGAP36Q6ZRI8 547 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 TAOK1Q7L7X3 1001 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 TADA2BQ86TJ2 420 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 ATPAF2Q8N5M1 289 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 CLP1Q92989 425 aaKnown RBP13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 HDAC11Q96DB2 347 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 AGAP3Q96P47 875 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 PHACTR1Q9C0D0 580 aa13.02□□□□□ -0.32
TNFAIP3-209ENST00000619035 E7ESA3 106 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 CDH16O75309 829 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 TCEA3O75764 348 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 BRAFP15056 766 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 HMGA1P17096 107 aaKnown RBP13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 HOXC13P31276 330 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 FDFT1P37268 417 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 GRIA1P42261 906 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 KCNQ1P51787 676 aa13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 KPNA1P52294 538 aaPredicted RBP13.02□□□□□ -0.33
TNFAIP3-209ENST00000619035 ZBTB17Q13105 803 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms