RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 NMD3Q96D46 503 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 KCNK16Q96T55 309 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 MECRQ9BV79 373 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC4A7Q9Y6M7 1214 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 DLDP09622 509 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 ETS2P15036 469 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 CD52P31358 61 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 BCAR1P56945 870 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 ACTR3P61158 418 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 CDC16Q13042 620 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 LINC01559Q495D7 138 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 RARS2Q5T160 578 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 AAGABQ6PD74 315 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 ANKS3Q6ZW76 656 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 POLNQ7Z5Q5 900 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SERINC5Q86VE9 423 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 LCA5Q86VQ0 697 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 NRG4Q8WWG1 115 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 WNT8BQ93098 351 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 C18orf25Q96B23 403 aaPredicted RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM136AQ96C01 138 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 C7orf26Q96N11 449 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 DEFB118Q96PH6 123 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SPATA16Q9BXB7 569 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 RNF208Q9H0X6 261 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 TRPV6Q9H1D0 765 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 XAB2Q9HCS7 855 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SORCS3Q9UPU3 1222 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 APOC4-APOC2K7ER74 178 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 APOC2P02655 101 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 GARSP41250 739 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 PRMT2P55345 433 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 MRPL58Q14197 206 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 CDO1Q16878 200 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 CNPY1Q3B7I2 92 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 CCDC14Q49A88 953 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 ACAD11Q709F0 780 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 POU5F2Q8N7G0 328 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 GSTCDQ8NEC7 633 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC35B2Q8TB61 432 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 ABTB1Q969K4 478 aaPredicted RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SERAC1Q96JX3 654 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 HEXIM2Q96MH2 286 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 TUBGCP5Q96RT8 1024 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 TRIM56Q9BRZ2 755 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SHCBP1LQ9BZQ2 653 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 PLEKHA5Q9HAU0 1116 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 THAP1Q9NVV9 213 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 DNAJB4Q9UDY4 337 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 SIX4Q9UIU6 781 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 UBQLN1Q9UMX0 589 aaKnown RBP7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 DNAJC16Q9Y2G8 782 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 DTNAQ9Y4J8 743 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 IPPQ9Y573 584 aa7.17□□□□□ -1.26
SRGAP3-213ENST00000618999 LOC100653049A0A140TA62 436 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 SMIM31A0A1B0GVY4 71 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM221BA6H8Z2 402 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 PRR5-ARHGAP8B1AHC4 643 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 KRT34O76011 436 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CHRNA1P02708 482 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 SERPINA6P08185 405 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 TCF4P15884 667 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 KDELR1P24390 212 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ARHGAP8P85298 464 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 DEUP1Q05D60 604 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 TMED1Q13445 227 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ZC3H12AQ5D1E8 599 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 FAM102AQ5T9C2 384 aaPredicted RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 FAXCQ5TGI0 409 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 RNF19BQ6ZMZ0 732 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 UNC45BQ8IWX7 931 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 NAT8LQ8N9F0 302 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CEP70Q8NHQ1 597 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CFHR5Q9BXR6 569 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC7A8Q9UHI5 535 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ITGA11Q9UKX5 1188 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 PDE5AO76074 875 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 HSPA4LO95757 839 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ACO1P21399 889 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 GDF10P55107 478 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 SLC25A3Q00325 362 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 GAD2Q05329 585 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 UBAP2LQ14157 1087 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CTC1Q2NKJ3 1217 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 MSS51Q4VC12 460 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 OR6B2Q6IFH4 312 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ZCCHC23Q6ZST2 131 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 TNS4Q8IZW8 715 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 OR6B3Q8NGW1 331 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 LPPQ93052 612 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 PRR11Q96HE9 360 aaPredicted RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 ZMAT2Q96NC0 199 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 SIKE1Q9BRV8 207 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CXCL16Q9H2A7 254 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 CHCHD3Q9NX63 227 aaKnown RBP7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 TUBGCP4Q9UGJ1 667 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 SFMBT1Q9UHJ3 866 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 PADI3Q9ULW8 664 aa7.16□□□□□ -1.26
SRGAP3-213ENST00000618999 FAF1Q9UNN5 650 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms