RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 UBE2J1Q9Y385 318 aaPredicted RBP3.29□□□□□ -1.88
TARDBP-220ENST00000618606 BTBD18B2RXH4 712 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 NEURL1O76050 574 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 ZNF432O94892 652 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 IGFBP2P18065 325 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 COMPP49747 757 aaPredicted RBP3.28□□□□□ -1.88
TARDBP-220ENST00000618606 KIF5AQ12840 1032 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 GFOD2Q3B7J2 385 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 PRAMEF19Q5SWL8 479 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 HIST2H2BCQ6DN03 193 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 WDR93Q6P2C0 686 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 ADGRF3Q8IZF5 1079 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 MYO1HQ8N1T3 1032 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 ENGASEQ8NFI3 743 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 COLEC11Q9BWP8 271 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 SFXN1Q9H9B4 322 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 FBXO28Q9NVF7 368 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 OBP2AQ9NY56 170 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 ICAM5Q9UMF0 924 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 CORO2BQ9UQ03 480 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 PCDHB7Q9Y5E2 793 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 PCDHGB1Q9Y5G3 927 aa3.28□□□□□ -1.88
TARDBP-220ENST00000618606 A0A1W2PPC4 97 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 TSPAN6O43657 245 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 LDB3O75112 727 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 IDEP14735 1019 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 PECAM1P16284 738 aaPredicted RBP3.27□□□□□ -1.89
TARDBP-220ENST00000618606 PDLIM4P50479 330 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 POLE2P56282 527 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 SELENOVP59797 346 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 ERVFC1-1P60608 527 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 SHC2P98077 582 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 DSC1Q08554 894 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 PMPCAQ10713 525 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 MAPKAPK3Q16644 382 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 P3H1Q32P28 736 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 ARHGAP15Q53QZ3 475 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 ENTPD8Q5MY95 495 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 DCAF12L2Q5VW00 463 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 ARMC9Q7Z3E5 817 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 KRT27Q7Z3Y8 459 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 KDM1BQ8NB78 822 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 ADPRHL1Q8NDY3 354 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 WDR77Q9BQA1 342 aaPredicted RBP3.27□□□□□ -1.89
TARDBP-220ENST00000618606 FSCN3Q9NQT6 498 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 PRDM11Q9NQV5 511 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.27□□□□□ -1.89
TARDBP-220ENST00000618606 PLEKHB1Q9UF11 243 aaPredicted RBP3.27□□□□□ -1.89
TARDBP-220ENST00000618606 KCNG2Q9UJ96 466 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 TNFSF13BQ9Y275 285 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 DTX4Q9Y2E6 619 aa3.27□□□□□ -1.89
TARDBP-220ENST00000618606 POM121BA6NF01 834 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 KCNJ18B7U540 433 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 I6L893 689 aaPredicted RBP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 NKX2-8O15522 239 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 TAF5LO75529 589 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 ITGA5P08648 1049 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 SRGAP2BP0DMP2 458 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 TSHRP16473 764 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 CASP5P51878 434 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 ZP1P60852 638 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 NSUN2Q08J23 767 aaKnown RBP eCLIP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 GPR18Q14330 331 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 CSHL1Q14406 222 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 IZUMO4Q1ZYL8 232 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 DNTTIP2Q5QJE6 756 aaKnown RBP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 FNBP1LQ5T0N5 605 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 C10orf76Q5T2E6 689 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 LCE1FQ5T754 118 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 OTUD1Q5VV17 481 aaPredicted RBP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 SPSB3Q6PJ21 355 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 C16orf82Q7Z2V1 217 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 CADM3Q8N126 398 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 CLIP4Q8N3C7 705 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 GLIS1Q8NBF1 620 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 SLC22A17Q8WUG5 538 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 ADAMTS14Q8WXS8 1223 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 FAR2Q96K12 515 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 EIF2AQ9BY44 585 aaKnown RBP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 PNRC2Q9NPJ4 139 aaKnown RBP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 DDX21Q9NR30 783 aaKnown RBP eCLIP3.26□□□□□ -1.89
TARDBP-220ENST00000618606 RNF146Q9NTX7 359 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 RGL1Q9NZL6 768 aa3.26□□□□□ -1.89
TARDBP-220ENST00000618606 LOC105369274A0A096LPK9 316 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 LOC102723532A0A0G2JNH3 316 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 CXorf65A6NEN9 183 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 SRRM3A6NNA2 597 aaPredicted RBP3.25□□□□□ -1.89
TARDBP-220ENST00000618606 SMTNL1A8MU46 457 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 DDNO94850 711 aaPredicted RBP3.25□□□□□ -1.89
TARDBP-220ENST00000618606 NDST3O95803 873 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 ALDOCP09972 364 aaKnown RBP3.25□□□□□ -1.89
TARDBP-220ENST00000618606 SLC16A2P36021 539 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 SEC61A1P61619 476 aaKnown RBP3.25□□□□□ -1.89
TARDBP-220ENST00000618606 DUSP6Q16828 381 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 KRTAP24-1Q3LI83 254 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 ERAP2Q6P179 960 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 TMEM88Q6PEY1 159 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 OR4N4Q8N0Y3 316 aa3.25□□□□□ -1.89
TARDBP-220ENST00000618606 SLC25A41Q8N5S1 370 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms