RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 PDE1CQ14123 709 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 MORC3Q14149 939 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 KRT32Q14532 448 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 SNX17Q15036 470 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 MLANAQ16655 118 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 CERKLQ49MI3 558 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 TDRD12Q587J7 1177 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 FAM209BQ5JX69 171 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 RBM20Q5T481 1227 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 SFRP5Q5T4F7 317 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ARHGEF16Q5VV41 709 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ANKRD40Q6AI12 368 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 FAM109BQ6ICB4 259 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 PLBD1Q6P4A8 553 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 SYCE2Q6PIF2 218 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 BLOC1S2Q6QNY1 142 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 KYAT3Q6YP21 454 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 BTN2A1Q7KYR7 527 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 CYB5R4Q7L1T6 521 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 LPCAT2Q7L5N7 544 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 OTOP3Q7RTS5 596 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 UBE3DQ7Z6J8 389 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 RASSF3Q86WH2 238 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ANKLE2Q86XL3 938 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ZNF354CQ86Y25 554 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 SPACA3Q8IXA5 215 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 PALM2Q8IXS6 379 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 DIS3L2Q8IYB7 885 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 TBC1D21Q8IYX1 336 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 MFSD4AQ8N468 514 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 LIX1Q8N485 282 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ZNF565Q8N9K5 539 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ASCC1Q8N9N2 400 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 TEX19Q8NA77 164 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 CATSPER1Q8NEC5 780 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 OR52K2Q8NGK3 314 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 NCOA7Q8NI08 942 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 TBC1D15Q8TC07 691 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 SH3RF3Q8TEJ3 882 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 PPP4R1Q8TF05 950 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 XAGE3Q8WTP9 111 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 TGFBRAP1Q8WUH2 860 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 CAPSLQ8WWF8 208 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 SLC44A1Q8WWI5 657 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ZNF606Q8WXB4 792 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 DHX38Q92620 1227 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 FATE1Q969F0 183 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 LRRC59Q96AG4 307 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 PLPPR2Q96GM1 343 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 TMEM80Q96HE8 168 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 MAP6Q96JE9 813 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 CNDP2Q96KP4 475 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 MAGEB18Q96M61 343 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ASB16Q96NS5 453 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 LRRC37BQ96QE4 947 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 NUP88Q99567 741 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 DOK1Q99704 481 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 PRMT1Q99873 361 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 DDX50Q9BQ39 737 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 BTBD10Q9BSF8 475 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 C1QTNF7Q9BXJ2 289 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ZNF717Q9BY31 904 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 ROPN1BQ9BZX4 212 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 LMAN2LQ9H0V9 348 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 TNKS2Q9H2K2 1166 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ATP13A3Q9H7F0 1226 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 PHAXQ9H814 394 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 MMRN2Q9H8L6 949 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 ROPN1Q9HAT0 212 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.6□□□□□ -1.83
SMC5-204ENST00000618375 KCNK13Q9HB14 408 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 NTN4Q9HB63 628 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 CPNE5Q9HCH3 593 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 WDR6Q9NNW5 1121 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 IL1RAPL2Q9NP60 686 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 TIGARQ9NQ88 270 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 OLFML3Q9NRN5 406 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 RBM12Q9NTZ6 932 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 ASNSD1Q9NWL6 643 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 GDAP2Q9NXN4 497 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 SNTG2Q9NY99 539 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 NPAP1Q9NZP6 1156 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 SENP1Q9P0U3 644 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 EXTL2Q9UBQ6 330 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 MALT1Q9UDY8 824 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 LIMA1Q9UHB6 759 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 CNOT7Q9UIV1 285 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 LAMP5Q9UJQ1 280 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 TMEM59LQ9UK28 342 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 RAB26Q9ULW5 256 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 DTX4Q9Y2E6 619 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 VWA7Q9Y334 891 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 RBMX2Q9Y388 322 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 NOC2LQ9Y3T9 749 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 PRKAB1Q9Y478 270 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 MN1Q10571 1320 aaPredicted RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 FRMPD4Q14CM0 1322 aa3.6□□□□□ -1.83
SMC5-204ENST00000618375 MAP2P11137 1827 aaKnown RBP3.6□□□□□ -1.83
SMC5-204ENST00000618375 NCAPD2Q15021 1401 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms