RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 EMC10Q5UCC4 262 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 PKN3Q6P5Z2 889 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 TRMT11Q7Z4G4 463 aaKnown RBP17.68■□□□□ 0.42
SBDS-205ENST00000617799 C1orf210Q8IVY1 113 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 SPEM1Q8N4L4 309 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 CCDC33Q8N5R6 958 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 ALLCQ8N6M5 410 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 ARFGAP1Q8N6T3 406 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 EPAS1Q99814 870 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 DHX35Q9H5Z1 703 aaKnown RBP17.68■□□□□ 0.42
SBDS-205ENST00000617799 ZWILCHQ9H900 591 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 OSGEPQ9NPF4 335 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 MPP6Q9NZW5 540 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 KIAA1522Q9P206 1035 aaPredicted RBP17.68■□□□□ 0.42
SBDS-205ENST00000617799 USP18Q9UMW8 372 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 REXO2Q9Y3B8 237 aaKnown RBP17.68■□□□□ 0.42
SBDS-205ENST00000617799 HCN4Q9Y3Q4 1203 aa17.68■□□□□ 0.42
SBDS-205ENST00000617799 ANTXRLA6NF34 631 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 GALR2O43603 387 aaPredicted RBP17.67■□□□□ 0.42
SBDS-205ENST00000617799 CNTN5O94779 1100 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 PROSCO94903 275 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 GJC1P36383 396 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 CXCL12P48061 93 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 ZNF135P52742 658 aaPredicted RBP17.67■□□□□ 0.42
SBDS-205ENST00000617799 NUBP1P53384 320 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 OXCT1P55809 520 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 MESDQ14696 234 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 HADHQ16836 314 aaKnown RBP17.67■□□□□ 0.42
SBDS-205ENST00000617799 ALFQ53S48 1182 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 FSCBQ5H9T9 825 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 ERMARDQ5T6L9 678 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 EGFLAMQ63HQ2 1017 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 RNF43Q68DV7 783 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 SDE2Q6IQ49 451 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 C11orf63Q6NUN7 778 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 ZNF683Q8IZ20 524 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 CHPFQ8IZ52 775 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 PYROXD2Q8N2H3 581 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.67■□□□□ 0.42
SBDS-205ENST00000617799 TBC1D31Q96DN5 1066 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 PEBP4Q96S96 227 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 DESI2Q9BSY9 194 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 SNRNP25Q9BV90 132 aaKnown RBP17.67■□□□□ 0.42
SBDS-205ENST00000617799 MAGEB5Q9BZ81 275 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 MUC3BQ9H195 1237 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 KCNF1Q9H3M0 494 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 SLC8A2Q9UPR5 921 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 PPP2R2CQ9Y2T4 447 aa17.67■□□□□ 0.42
SBDS-205ENST00000617799 IGLV3-10A0A075B6K4 115 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 DRGXA6NNA5 263 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 FAM72CH0Y354 149 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 TIMM44O43615 452 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 LRIG2O94898 1065 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 RHOCP08134 193 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 POLR2EP19388 210 aaKnown RBP17.66■□□□□ 0.42
SBDS-205ENST00000617799 OR1E1P30953 314 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 L1CAMP32004 1257 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 CSKP41240 450 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 WASP42768 502 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 KIR2DL1P43626 348 aaPredicted RBP17.66■□□□□ 0.42
SBDS-205ENST00000617799 NUMBP49757 651 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 NAP1L1P55209 391 aaKnown RBP17.66■□□□□ 0.42
SBDS-205ENST00000617799 SATB1Q01826 763 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 NRG1Q02297 640 aaPredicted RBP17.66■□□□□ 0.42
SBDS-205ENST00000617799 E2F5Q15329 346 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 SMTNL2Q2TAL5 461 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 FUT11Q495W5 492 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 C5orf22Q49AR2 442 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 PPP6R3Q5H9R7 873 aaPredicted RBP17.66■□□□□ 0.42
SBDS-205ENST00000617799 PITRM1Q5JRX3 1037 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 FAM72AQ5TYM5 149 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 MBLAC2Q68D91 279 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 FAM72DQ6L9T8 149 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 FAM72BQ86X60 149 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 TXNDC5Q8NBS9 432 aaKnown RBP17.66■□□□□ 0.42
SBDS-205ENST00000617799 KCNV2Q8TDN2 545 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 SORCS1Q8WY21 1168 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 HSPH1Q92598 858 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 ALS2CR12Q96Q35 445 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 PRRX2Q99811 253 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 KCND1Q9NSA2 647 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 ELOVL2Q9NXB9 296 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 PPARGC1AQ9UBK2 798 aaKnown RBP17.66■□□□□ 0.42
SBDS-205ENST00000617799 TFR2Q9UP52 801 aa17.66■□□□□ 0.42
SBDS-205ENST00000617799 CHURC1-FNTBB4DL54 471 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 ATP5BP06576 529 aaKnown RBP17.65■□□□□ 0.42
SBDS-205ENST00000617799 TCF4P15884 667 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 EPHB2P29323 1055 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 HTR7P34969 479 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 TPI1P60174 286 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 CSTF1Q05048 431 aaKnown RBP17.65■□□□□ 0.42
SBDS-205ENST00000617799 SLC12A1Q13621 1099 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 DMC1Q14565 340 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 ANGPT1Q15389 498 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 HSF5Q4G112 596 aaPredicted RBP17.65■□□□□ 0.42
SBDS-205ENST00000617799 FNDC3BQ53EP0 1204 aaKnown RBP17.65■□□□□ 0.42
SBDS-205ENST00000617799 BOLA3Q53S33 107 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 EOGTQ5NDL2 527 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 ZFYVE27Q5T4F4 411 aa17.65■□□□□ 0.42
SBDS-205ENST00000617799 C6orf118Q5T5N4 469 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms