RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CA4P22748 312 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 MGAT1P26572 445 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 HOXC13P31276 330 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 CD68P34810 354 aaPredicted RBP17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 EFEMP1Q12805 493 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 DUSP4Q13115 394 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 CASC4Q6P4E1 433 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 ARHGAP12Q8IWW6 846 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 GSDMBQ8TAX9 411 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 SPPL2BQ8TCT7 592 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 STAMBPL1Q96FJ0 436 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 SGSM3Q96HU1 749 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 TLR6Q9Y2C9 796 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 RRP15Q9Y3B9 282 aaKnown RBP17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 FAM169AQ9Y6X4 670 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 E9PAM4 449 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 ZNF189O75820 626 aaPredicted RBP17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 GSTA2P09210 222 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 TUBP50607 506 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 TAF10Q12962 218 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 GKAP1Q5VSY0 366 aaPredicted RBP17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 ANKS3Q6ZW76 656 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 SLC39A13Q96H72 371 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 BEGAINQ9BUH8 593 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 NDFIP2Q9NV92 336 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 CDY1Q9Y6F8 540 aa17.78■□□□□ 0.44
PCDHGC3-205ENST00000617641 IQANK1A0A1B0GTG1 560 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 FAM92AA1XBS5 289 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 SDR42E2A6NKP2 422 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 ADAM12O43184 909 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 MTSS1O43312 755 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 UGT1A9O60656 530 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 ASMTLO95671 621 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 JCHAINP01591 159 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 HAPLN1P10915 354 aaPredicted RBP17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 TBX4P57082 545 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 SLC1A5Q15758 541 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 TEX44Q53QW1 395 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 PIK3R6Q5UE93 754 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 SRLQ86TD4 932 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 SLC26A11Q86WA9 606 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 LRRC6Q86X45 466 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 CACNA2D3Q8IZS8 1091 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 DIS3LQ8TF46 1054 aaKnown RBP17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 DPF3Q92784 378 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 GBA3Q9H227 469 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 CATSPERBQ9H7T0 1116 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 UGT1A7Q9HAW7 530 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 UGT1A10Q9HAW8 530 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 UGT1A8Q9HAW9 530 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 MPP6Q9NZW5 540 aa17.77■□□□□ 0.44
PCDHGC3-205ENST00000617641 FGF10O15520 208 aaPredicted RBP17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 USP12O75317 370 aa17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 RTN3O95197 1032 aaPredicted RBP17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 NFKB1P19838 968 aa17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 RASIP1Q5U651 963 aa17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 FAM43BQ6ZT52 329 aaPredicted RBP17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZSCAN18Q8TBC5 510 aaPredicted RBP17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 USP33Q8TEY7 942 aa17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 GIPC2Q8TF65 315 aa17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 TGS1Q96RS0 853 aaKnown RBP17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 SYBUQ9NX95 663 aa17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 TRHDEQ9UKU6 1024 aa17.77■□□□□ 0.43
PCDHGC3-205ENST00000617641 PARNO95453 639 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 MT-ND3P03897 115 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 CSH1P0DML2 217 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 CSH2P0DML3 217 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 RPL17P18621 184 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 FOXN2P32314 431 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 GBP2P32456 591 aaPredicted RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 HTR7P34969 479 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 ALDH7A1P49419 539 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC18A1P54219 525 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 COG7P83436 770 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 IL9RQ01113 521 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 UNC5BQ8IZJ1 945 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 ATPAF2Q8N5M1 289 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 OR52K1Q8NGK4 314 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 ARNTL2Q8WYA1 636 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 SERAC1Q96JX3 654 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 SPATA17Q96L03 361 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 MAGEB18Q96M61 343 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 ELAC2Q9BQ52 826 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 MLPHQ9BV36 600 aaPredicted RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC39A8Q9C0K1 460 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 FGFR1OP2Q9NVK5 253 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 GRID1Q9ULK0 1009 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 ATP11BQ9Y2G3 1177 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 GREB1Q4ZG55 1949 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 FAM159BA6NKW6 160 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 AP2A1O95782 977 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 MLLT6P55198 1093 aaPredicted RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 IFT88Q13099 833 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZKSCAN8Q15776 578 aaPredicted RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 STEAP4Q687X5 459 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 MIB1Q86YT6 1006 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 FBXO22Q8NEZ5 403 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 VWCEQ96DN2 955 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 TEKT5Q96M29 485 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms