RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CYP1A1P04798 512 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 GYPCP04921 128 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ITGB5P18084 799 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 MAPKAPK2P49137 400 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ITGB3BPQ13352 177 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 XKR4Q5GH76 650 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 RAET1GQ6H3X3 334 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ANO5Q75V66 913 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ECHDC2Q86YB7 292 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 BBS7Q8IWZ6 715 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CMTR2Q8IYT2 770 aaKnown RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 KATNAL2Q8IYT4 538 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 KCTD13Q8WZ19 329 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 HAS1Q92839 578 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 SOHLH2Q9NX45 425 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CDH4P55283 916 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 RAP1GAP2Q684P5 730 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 RD3Q7Z3Z2 195 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 KIAA0895Q8NCT3 520 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZNF670Q9BS34 389 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 PRRG3Q9BZD7 231 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ABCG4Q9H172 646 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 VIPAS39Q9H9C1 493 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 AMACRQ9UHK6 382 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ASTN2O75129 1339 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 MGAT4DA6NG13 374 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 IRAK2O43187 625 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 TSHRP16473 764 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 GTF2E2P29084 291 aaKnown RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 DPP6P42658 865 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 DAB2P98082 770 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CCDC153Q494R4 210 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CBWD3Q5JTY5 395 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CBWD5Q5RIA9 395 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ANKS1BQ7Z6G8 1248 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CELF5Q8N6W0 485 aaKnown RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 OVCA2Q8WZ82 227 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 RERGQ96A58 199 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 IARS2Q9NSE4 1012 aaKnown RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CATSPERZQ9NTU4 200 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 H2AFY2Q9P0M6 372 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 MTO1Q9Y2Z2 717 aaKnown RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 SMIM28A0A1B0GU29 152 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ARL5CA6NH57 179 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 PCNAP12004 261 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 SNCBQ16143 134 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 DNAL1Q4LDG9 190 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 EPC2Q52LR7 807 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CDKAL1Q5VV42 579 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 KRT80Q6KB66 452 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CHST9Q7L1S5 443 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 SH3BP5LQ7L8J4 393 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 OTOAQ7RTW8 1153 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ARHGEF19Q8IW93 802 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 IL31RAQ8NI17 732 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ATXN7L3BQ96GX2 97 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 RAD9AQ99638 391 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 SHOC2Q9UQ13 582 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 PCDHGC5Q9Y5F6 944 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 UBXN8O00124 270 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 TAL1P17542 331 aaPredicted RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 TTPAP49638 278 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CCNG1P51959 295 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 LBX1P52954 281 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 RRP1BQ14684 758 aaKnown RBP9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 FAM187BQ17R55 369 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 CYP20A1Q6UW02 462 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 KLHL29Q96CT2 875 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 PCMTD2Q9NV79 361 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 MPP6Q9NZW5 540 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 ABI3Q9P2A4 366 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 OR12D3Q9UGF7 316 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 BAIAP2L1Q9UHR4 511 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 GPSM3Q9Y4H4 160 aa9.94□□□□□ -0.82
TNFRSF9-204ENST00000615230 GYG2O15488 501 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 GPC1P35052 558 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 CAP1Q01518 475 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 ATAD3BQ5T9A4 648 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 SAPCD2Q86UD0 394 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 CHAMP1Q96JM3 812 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 ZBTB45Q96K62 511 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 SLC24A2Q9UI40 661 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 PTPRJQ12913 1337 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 E5RJQ4 531 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 APOC4-APOC2K7ER74 178 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 PER2O15055 1255 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 APOC2P02655 101 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 RB1P06400 928 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 ATP4AP20648 1035 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 MATKP42679 507 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 NDUFA9Q16795 377 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 PUS10Q3MIT2 529 aaKnown RBP9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 TFAP2DQ7Z6R9 452 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 NKAPQ8N5F7 415 aaKnown RBP9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 SLC35C1Q96A29 364 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 DHX33Q9H6R0 707 aaKnown RBP9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 POLG2Q9UHN1 485 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 NEDD8-MDP1E9PL57 170 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 PPP2R1BP30154 601 aa9.93□□□□□ -0.82
TNFRSF9-204ENST00000615230 PCID2Q5JVF3 399 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms