RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 BCCIPQ9P287 314 aaKnown RBP eCLIP5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF212Q9UDV6 495 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 FBXO4Q9UKT5 387 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 NBEAQ8NFP9 2946 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 H0Y626 953 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 GOLGA6L19H0YKK7 550 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 KCNK3O14649 394 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 WNT9AO14904 365 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ACSL1P33121 698 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ASIC2Q16515 512 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 PLK5Q496M5 336 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 TDRD12Q587J7 1177 aaKnown RBP5.88□□□□□ -1.47
CPNE3-208ENST00000614678 PRAMEF14Q5SWL7 426 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 SFMBT2Q5VUG0 894 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 KIAA1324Q6UXG2 1013 aaKnown RBP5.88□□□□□ -1.47
CPNE3-208ENST00000614678 OTUB2Q96DC9 234 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 XPO6Q96QU8 1125 aaKnown RBP5.88□□□□□ -1.47
CPNE3-208ENST00000614678 DNAI2Q9GZS0 605 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 TNKS2Q9H2K2 1166 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 EBF2Q9HAK2 575 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 OSGEPQ9NPF4 335 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 DSPP15924 2871 aaKnown RBP5.88□□□□□ -1.47
CPNE3-208ENST00000614678 LUC7L3O95232 432 aaKnown RBP5.88□□□□□ -1.47
CPNE3-208ENST00000614678 CD160O95971 181 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 NTSR1P30989 418 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 CCR1P32246 355 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 SLC11A2P49281 568 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 SEMG2Q02383 582 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 CREB5Q02930 508 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 RING1Q06587 406 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 CDH18Q13634 790 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 MAP7D1Q3KQU3 841 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 MPPE1Q53F39 396 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 PITRM1Q5JRX3 1037 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ACAD10Q6JQN1 1059 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 SERPINA13PQ6UXR4 307 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ARHGAP36Q6ZRI8 547 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ANKS1BQ7Z6G8 1248 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ANKRD20A12PQ8NF67 263 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 RMDN1Q96DB5 314 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 BTN2A3PQ96KV6 586 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 NSMCE3Q96MG7 304 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 PSMB7Q99436 277 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 TMEM245Q9H330 911 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 ARHGEF38Q9NXL2 777 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 AIPL1Q9NZN9 384 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 WDR35Q9P2L0 1181 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 THAP10Q9P2Z0 257 aaPredicted RBP5.88□□□□□ -1.47
CPNE3-208ENST00000614678 STARD13Q9Y3M8 1113 aa5.88□□□□□ -1.47
CPNE3-208ENST00000614678 A0A0U1RQS6 177 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 FAM47DPA6NHR8 397 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 PROB1E7EW31 1015 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 E9PAM4 449 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 SIN3BO75182 1162 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 TPM2P07951 284 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CD48P09326 243 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 TNFAIP3P21580 790 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 EIF4A3P38919 411 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 BPIFB4P59827 614 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 PTPRRQ15256 657 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 NUGGCQ68CJ6 796 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 LONP2Q86WA8 852 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 RASSF3Q86WH2 238 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 TMPRSS6Q8IU80 811 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF397Q8NF99 534 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 EPC1Q9H2F5 836 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 NOL6Q9H6R4 1146 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 PRSS16Q9NQE7 514 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 ETNK2Q9NVF9 386 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 SLC27A6Q9Y2P4 619 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 OR51B4Q9Y5P0 310 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 NYNRINQ9P2P1 1898 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 IGF2RP11717 2491 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 A0A1W2PQC6 194 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 GOLGA8CPA6NN73 597 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 LRIG2O94898 1065 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 APOEP02649 317 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CTSLP07711 333 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 ITIH2P19823 946 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 PLEKHG6Q3KR16 790 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 FNDC3BQ53EP0 1204 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 RNF219Q5W0B1 726 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 NYAP1Q6ZVC0 841 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 Q6ZVU0 165 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CEP68Q76N32 757 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 TADA2BQ86TJ2 420 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 PHF13Q86YI8 300 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CHST14Q8NCH0 376 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 PTPRN2Q92932 1015 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CELF6Q96J87 481 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 FEM1AQ9BSK4 669 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CA5BQ9Y2D0 317 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CEP83Q9Y592 693 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 PCDHGA2Q9Y5H1 932 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 CREB3O43889 395 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF821O75541 412 aaPredicted RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 LSM8O95777 96 aaKnown RBP5.87□□□□□ -1.47
CPNE3-208ENST00000614678 TNFRSF4P43489 277 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 RNF43Q68DV7 783 aa5.87□□□□□ -1.47
CPNE3-208ENST00000614678 RWDD4Q6NW29 188 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms