RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 CHSY1Q86X52 802 aa18.48■□□□□ 0.55
SMN2-213ENST00000614240 ARHGEF19Q8IW93 802 aa18.48■□□□□ 0.55
SMN2-213ENST00000614240 OR2T34Q8NGX1 318 aa18.48■□□□□ 0.55
SMN2-213ENST00000614240 SPATA20Q8TB22 786 aa18.48■□□□□ 0.55
SMN2-213ENST00000614240 MRGPRX3Q96LB0 322 aa18.48■□□□□ 0.55
SMN2-213ENST00000614240 SERGEFQ9UGK8 458 aa18.48■□□□□ 0.55
SMN2-213ENST00000614240 A0A1B0GTQ1 180 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 ABCB4P21439 1286 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 GCNT1Q02742 428 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 ARID5BQ14865 1188 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 RAP1GAP2Q684P5 730 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 DHRS13Q6UX07 377 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 GATAD2AQ86YP4 633 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 EHBP1Q8NDI1 1231 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 OR14C36Q8NHC7 312 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 LMO3Q8TAP4 145 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 SLC39A13Q96H72 371 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 ORAI3Q9BRQ5 295 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 SLC12A6Q9UHW9 1150 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 SLCO3A1Q9UIG8 710 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 FZD4Q9ULV1 537 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 KNL1Q8NG31 2342 aa18.47■□□□□ 0.55
SMN2-213ENST00000614240 MUC22E2RYF6 1773 aaPredicted RBP18.47■□□□□ 0.55
SMN2-213ENST00000614240 ANKRD11Q6UB99 2663 aaPredicted RBP18.46■□□□□ 0.55
SMN2-213ENST00000614240 MED7O43513 233 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 ITGAVP06756 1048 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 CD44P16070 742 aaKnown RBP18.46■□□□□ 0.55
SMN2-213ENST00000614240 TACR2P21452 398 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 CD38P28907 300 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 GPD2P43304 727 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 SLC45A4Q5BKX6 768 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 ZC3H12AQ5D1E8 599 aaKnown RBP18.46■□□□□ 0.55
SMN2-213ENST00000614240 SYPL2Q5VXT5 272 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 DENND1BQ6P3S1 775 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 SND1Q7KZF4 910 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMN2-213ENST00000614240 APCDD1Q8J025 514 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 STK40Q8N2I9 435 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 PDCD7Q8N8D1 485 aaKnown RBP18.46■□□□□ 0.55
SMN2-213ENST00000614240 NELFBQ8WX92 580 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 RPL10LQ96L21 214 aaKnown RBP18.46■□□□□ 0.55
SMN2-213ENST00000614240 TIGD1Q96MW7 591 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 ELF4Q99607 663 aaPredicted RBP18.46■□□□□ 0.55
SMN2-213ENST00000614240 ADAMTS1Q9UHI8 967 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 XPO7Q9UIA9 1087 aaKnown RBP18.46■□□□□ 0.55
SMN2-213ENST00000614240 MAN1B1Q9UKM7 699 aa18.46■□□□□ 0.55
SMN2-213ENST00000614240 PLXNB3Q9ULL4 1909 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3DA0A087WVF3 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3IA0A087WXS9 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3EA0A087X179 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3KA0A087X1G2 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 BICDL2A1A5D9 508 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3FA6NER0 549 aaPredicted RBP18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3LB9A6J9 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 F5H5T6 163 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 LETM1O95202 739 aaPredicted RBP18.45■□□□□ 0.54
SMN2-213ENST00000614240 ADH1BP00325 375 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 IL1BP01584 269 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3HP0C7X1 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 GOT1P17174 413 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 C5AR1P21730 350 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 CCR5P51681 352 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 KCNH2Q12809 1159 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 SMAD1Q15797 465 aaKnown RBP18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3GQ6DHY5 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3CQ6IPX1 549 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 TBC1D3Q8IZP1 549 aaPredicted RBP18.45■□□□□ 0.54
SMN2-213ENST00000614240 ATP6V0D2Q8N8Y2 350 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 SERAC1Q96JX3 654 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 BTN2A3PQ96KV6 586 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 MED15Q96RN5 788 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 FAM129BQ96TA1 746 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 INTS2Q9H0H0 1204 aaKnown RBP18.45■□□□□ 0.54
SMN2-213ENST00000614240 POPDC2Q9HBU9 364 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 GDF3Q9NR23 364 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 DKK4Q9UBT3 224 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.45■□□□□ 0.54
SMN2-213ENST00000614240 CABIN1Q9Y6J0 2220 aa18.45■□□□□ 0.54
SMN2-213ENST00000614240 PAPSS1O43252 624 aaPredicted RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 LDOC1O95751 146 aaPredicted RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 GNA14O95837 355 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 TRUB2O95900 331 aaKnown RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 WNT1P04628 370 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 RPL34P49207 117 aaKnown RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 ARRB1P49407 418 aaPredicted RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 NUMBP49757 651 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 YWHAZP63104 245 aaKnown RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 TTI2Q6NXR4 508 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 BEND5Q7L4P6 421 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 TMPRSS12Q86WS5 348 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 AADATQ8N5Z0 425 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 STK32AQ8WU08 396 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 RNF34Q969K3 372 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 LRIG1Q96JA1 1093 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 CNDP2Q96KP4 475 aaKnown RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 KREMEN1Q96MU8 473 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 EBF2Q9HAK2 575 aa18.44■□□□□ 0.54
SMN2-213ENST00000614240 UBE2TQ9NPD8 197 aaPredicted RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 TPX2Q9ULW0 747 aaKnown RBP18.44■□□□□ 0.54
SMN2-213ENST00000614240 CTNND2Q9UQB3 1225 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms