RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 TMEM191BP0C7N4 346 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 ZFXP17010 805 aaPredicted RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 L1CAMP32004 1257 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 RPL22P35268 128 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 UBAP2LQ14157 1087 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 KBTBD12Q3ZCT8 623 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 SEZ6Q53EL9 994 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 PQLC1Q8N2U9 271 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 CCDC127Q96BQ5 260 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 CMTM5Q96DZ9 223 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 FRMD8Q9BZ67 464 aaPredicted RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 DDX18Q9NVP1 670 aaKnown RBP22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 ZNF232Q9UNY5 417 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 INPP5FQ9Y2H2 1132 aa22.5■■□□□ 1.19
POLR2J3-220ENST00000613744 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 A0A0B4J269 797 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 GARTP22102 1010 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 ACOT2P49753 483 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 ERFP50548 548 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 TAP1Q03518 808 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 STX3Q13277 289 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 TUBB3Q13509 450 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 FAM187BQ17R55 369 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 ZPBP2Q6X784 338 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 TSHZ1Q6ZSZ6 1077 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 SMYD3Q9H7B4 428 aa22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 AGO2Q9UKV8 859 aaKnown RBP22.49■■□□□ 1.19
POLR2J3-220ENST00000613744 MEI4A8MW99 385 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 TRIM49D1C9J1S8 452 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 TOM1L1O75674 476 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 BPGMP07738 259 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 GALK1P51570 392 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 GAD2Q05329 585 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 CYP24A1Q07973 514 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 PPIDQ08752 370 aaKnown RBP22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 ATP13A4Q4VNC1 1196 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 SLC44A4Q53GD3 710 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 RARS2Q5T160 578 aaKnown RBP22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 SLFN12LQ6IEE8 588 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 POLNQ7Z5Q5 900 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 FBXW8Q8N3Y1 598 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 GCNAQ96QF7 691 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 KLHL11Q9NVR0 708 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 TEX264Q9Y6I9 313 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 CNTNAP2Q9UHC6 1331 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 TMEM63AO94886 807 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 TIMP1P01033 207 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 WEE2P0C1S8 567 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 CD151P48509 253 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 PIGHQ14442 188 aaPredicted RBP22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 ZBTB41Q5SVQ8 909 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 STXBP5Q5T5C0 1151 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 Q6ZNX1 250 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 CDHR3Q6ZTQ4 885 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 GPD1LQ8N335 351 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 NIPA2Q8N8Q9 360 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 RSAD2Q8WXG1 361 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 HTATIP2Q9BUP3 242 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 GRIP2Q9C0E4 1043 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 PDZD7Q9H5P4 517 aa22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 APOBEC2Q9Y235 224 aaKnown RBP22.48■■□□□ 1.19
POLR2J3-220ENST00000613744 TRDMT1O14717 391 aaKnown RBP22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 KIAA0355O15063 1070 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 GPR182O15218 404 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 FAM58BPP0C7Q3 252 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 SLC5A2P31639 672 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 HDAC4P56524 1084 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 CNGA3Q16281 694 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 ZFP1Q6P2D0 407 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 C15orf39Q6ZRI6 1047 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 ADCY4Q8NFM4 1077 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 TET1Q8NFU7 2136 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 HAUS8Q9BT25 410 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 EIF2AQ9BY44 585 aaKnown RBP22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 UBAP1Q9NZ09 502 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 PRKAG2Q9UGJ0 569 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 STYXL1Q9Y6J8 313 aa22.47■■□□□ 1.19
POLR2J3-220ENST00000613744 CAPN8A6NHC0 703 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 MGEA5O60502 916 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CSF2RAP15509 400 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 ELK3P41970 407 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 EPHB1P54762 984 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 MTTPP55157 894 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 MRPS5P82675 430 aaKnown RBP22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 TCTN1Q2MV58 587 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 WDR44Q5JSH3 913 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 KLHL35Q6PF15 583 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 BBS12Q6ZW61 710 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 DBF4BQ8NFT6 615 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 PLGRKTQ9HBL7 147 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 XAB2Q9HCS7 855 aaKnown RBP22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 DNAJC28Q9NX36 388 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 TUBGCP4Q9UGJ1 667 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 BCAP29Q9UHQ4 241 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CEPT1Q9Y6K0 416 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CBFA2T3O75081 653 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CRTAMO95727 393 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CALB1P05937 261 aa22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CDH2P19022 906 aaPredicted RBP22.46■■□□□ 1.19
POLR2J3-220ENST00000613744 CRHR1P34998 444 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms