RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
FAM3A-221ENST00000612856 CES5AQ6NT32 575 aa11.11□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF280BQ86YH2 543 aa11.11□□□□□ -0.63
FAM3A-221ENST00000612856 GRIN3AQ8TCU5 1115 aa11.11□□□□□ -0.63
FAM3A-221ENST00000612856 SYN2Q92777 582 aaPredicted RBP11.11□□□□□ -0.63
FAM3A-221ENST00000612856 TCF25Q9BQ70 676 aa11.11□□□□□ -0.63
FAM3A-221ENST00000612856 ARHGEF38Q9NXL2 777 aa11.11□□□□□ -0.63
FAM3A-221ENST00000612856 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
FAM3A-221ENST00000612856 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.11□□□□□ -0.63
FAM3A-221ENST00000612856 MOXD2PA6NHM9 499 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CNMDO75829 334 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ZWINTO95229 277 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 GRM5P41594 1212 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 SH3BGRP55822 239 aaPredicted RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 SNRPFP62306 86 aaKnown RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TMTC4Q5T4D3 741 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 PPP1R2P3Q6NXS1 205 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 FUT10Q6P4F1 479 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TMA16Q96EY4 203 aaKnown RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TUBGCP5Q96RT8 1024 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 GPR63Q9BZJ6 419 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 C12orf65Q9H3J6 166 aaKnown RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 FBXO6Q9NRD1 293 aaPredicted RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 SPG21Q9NZD8 308 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CHKBQ9Y259 395 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CABIN1Q9Y6J0 2220 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 C3orf70A6NLC5 250 aaPredicted RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 E5RI56 91 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TLR5O60602 858 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TBX10O75333 385 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TRUB2O95900 331 aaKnown RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 F2P00734 622 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 MARSP56192 900 aaKnown RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ARL4CP56559 192 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CLEC16AQ2KHT3 1053 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 DUPD1Q68J44 220 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TSHZ1Q6ZSZ6 1077 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF467Q7Z7K2 595 aaPredicted RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 C12orf76Q8N812 135 aaPredicted RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 JOSD2Q8TAC2 188 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 NSL1Q96IY1 281 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ANKRD27Q96NW4 1050 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 EMILIN2Q9BXX0 1053 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 LATS2Q9NRM7 1088 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 APPL1Q9UKG1 709 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 SNX10Q9Y5X0 201 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 LYPLA2O95372 231 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ZSCAN5DPP0CG00 497 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 NPR3P17342 541 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ATXN1P54253 815 aaKnown RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 MAXP61244 160 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CBX3Q13185 183 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CLPTM1LQ96KA5 538 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 PLEKHG4BQ96PX9 1271 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CNPY3Q9BT09 278 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 CYP3A43Q9HB55 503 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 TLR8Q9NR97 1041 aaKnown RBP11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ADAM28Q9UKQ2 775 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF232Q9UNY5 417 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 PLA2G4CQ9UP65 541 aa11.1□□□□□ -0.63
FAM3A-221ENST00000612856 RHOCP08134 193 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 GCNT1Q02742 428 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 COL9A2Q14055 689 aaPredicted RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 EML3Q32P44 896 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 LIN52Q52LA3 116 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 EMC10Q5UCC4 262 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 NPNTQ6UXI9 565 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 PHC3Q8NDX5 983 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 PYDC1Q8WXC3 89 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ALG3Q92685 438 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF333Q96JL9 665 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SERPINB12Q96P63 405 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 RBM15Q96T37 977 aaKnown RBP eCLIP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 APOBEC3GQ9HC16 384 aaKnown RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 PGAP2Q9UHJ9 254 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ZNF180Q9UJW8 692 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 XPO1O14980 1071 aaKnown RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SCAMP1O15126 338 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 NUDT17P0C025 328 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 PYGMP11217 842 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 VAV1P15498 845 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 GM2AP17900 193 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 CHKAP35790 457 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 COILP38432 576 aaPredicted RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SEMG2Q02383 582 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ACSBG2Q5FVE4 666 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 LRRC8BQ6P9F7 803 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SPOCD1Q6ZMY3 1216 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 FAM183BPQ6ZVS7 135 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 TRMT10CQ7L0Y3 403 aaKnown RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 GALNT4Q8N4A0 578 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 SMG7Q92540 1137 aaKnown RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 CPXM1Q96SM3 734 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 PCDHB18PQ96TA0 734 aa11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ROPN1BQ9BZX4 212 aaPredicted RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 ROPN1Q9HAT0 212 aaPredicted RBP11.09□□□□□ -0.63
FAM3A-221ENST00000612856 TBC1D13Q9NVG8 400 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms