RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TMEM131Q92545 1883 aa18.39■□□□□ 0.53
SSBP1-215ENST00000612337 ITPR1Q14643 2758 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 THAP12O43422 761 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 TRUB2O95900 331 aaKnown RBP18.38■□□□□ 0.53
SSBP1-215ENST00000612337 CAPNS1P04632 268 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 IGHV4-34P06331 123 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 TACR2P21452 398 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 CTSOP43234 321 aaPredicted RBP18.38■□□□□ 0.53
SSBP1-215ENST00000612337 ECT2LQ008S8 904 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 PDCLQ13371 301 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 EIF4EBP2Q13542 120 aaPredicted RBP18.38■□□□□ 0.53
SSBP1-215ENST00000612337 CST6Q15828 149 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 C9orf64Q5T6V5 341 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 RAP1GAP2Q684P5 730 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 KIAA0895LQ68EN5 471 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 CHSY1Q86X52 802 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 GANCQ8TET4 914 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 IGSF8Q969P0 613 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 FAM81BQ96LP2 452 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 ACP6Q9NPH0 428 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 ITIH6Q6UXX5 1313 aa18.38■□□□□ 0.53
SSBP1-215ENST00000612337 PLXNB3Q9ULL4 1909 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 CACNA1GO43497 2377 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 EDDM13A0A1B0GTR0 161 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 TTC34A8MYJ7 566 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 MID1O15344 667 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 GALCP54803 685 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 TRIM65Q6PJ69 517 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 LAYNQ6UX15 382 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 CCNI2Q6ZMN8 369 aaPredicted RBP18.37■□□□□ 0.53
SSBP1-215ENST00000612337 ATP6V0D2Q8N8Y2 350 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 CRACR2AQ9BSW2 395 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.37■□□□□ 0.53
SSBP1-215ENST00000612337 TOR4AQ9NXH8 423 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 SERGEFQ9UGK8 458 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 ADAMTS1Q9UHI8 967 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 RWDD2AQ9UIY3 292 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 FZD4Q9ULV1 537 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 CEP83Q9Y592 693 aa18.37■□□□□ 0.53
SSBP1-215ENST00000612337 A0A1W2PP55 124 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 A0A1W2PPC4 97 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 KCNU1A8MYU2 1149 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 F5H5T6 163 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 PCDHGA12O60330 932 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 DKK1O94907 266 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 GLI1P08151 1106 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 PTPRBP23467 1997 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 CTSKP43235 329 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 CCT8P50990 548 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 RACK1P63244 317 aaKnown RBP18.36■□□□□ 0.53
SSBP1-215ENST00000612337 PITX1P78337 314 aaPredicted RBP18.36■□□□□ 0.53
SSBP1-215ENST00000612337 SCAPQ12770 1279 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 TAF5Q15542 800 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 RNF219Q5W0B1 726 aaPredicted RBP18.36■□□□□ 0.53
SSBP1-215ENST00000612337 GJB7Q6PEY0 223 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 NCEH1Q6PIU2 408 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 ADAT2Q7Z6V5 191 aaKnown RBP18.36■□□□□ 0.53
SSBP1-215ENST00000612337 PROSER1Q86XN7 944 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 MMAAQ8IVH4 418 aaKnown RBP18.36■□□□□ 0.53
SSBP1-215ENST00000612337 APCDD1Q8J025 514 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 PRMT1Q99873 361 aaKnown RBP18.36■□□□□ 0.53
SSBP1-215ENST00000612337 NEUROG2Q9H2A3 272 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 APEX2Q9UBZ4 518 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 SLC12A6Q9UHW9 1150 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 SLCO3A1Q9UIG8 710 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 BTBD3Q9Y2F9 522 aa18.36■□□□□ 0.53
SSBP1-215ENST00000612337 PLXNA2O75051 1894 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 FAM47DPA6NHR8 397 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 LRRC72A6NJI9 287 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 BECN2A8MW95 431 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 C10orf142B7Z368 130 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 TAF4O00268 1085 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 KCNK3O14649 394 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 RNASEH2AO75792 299 aaKnown RBP18.35■□□□□ 0.53
SSBP1-215ENST00000612337 SLC2A3P11169 496 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 SLC9A1P19634 815 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 SLC8A1P32418 973 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 GRK6P43250 576 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 CDK17Q00537 523 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 SLC12A1Q13621 1099 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 ARHGAP44Q17R89 818 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 KCNT1Q5JUK3 1230 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 TTC39BQ5VTQ0 682 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-215ENST00000612337 GBP6Q6ZN66 633 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 WDTC1Q8N5D0 677 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 OR2T34Q8NGX1 318 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 RPL10LQ96L21 214 aaKnown RBP18.35■□□□□ 0.53
SSBP1-215ENST00000612337 SLC2A13Q96QE2 648 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 FAM129BQ96TA1 746 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 OMDQ99983 421 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 ACE2Q9BYF1 805 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-215ENST00000612337 FAM204AQ9H8W3 233 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 ASNSD1Q9NWL6 643 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 ACACAQ13085 2346 aa18.35■□□□□ 0.53
SSBP1-215ENST00000612337 NYNRINQ9P2P1 1898 aaKnown RBP18.35■□□□□ 0.53
SSBP1-215ENST00000612337 H0Y8X5 98 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 VILLO15195 856 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 DFNA5O60443 496 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 ADH1BP00325 375 aa18.34■□□□□ 0.53
SSBP1-215ENST00000612337 ATXN1LP0C7T5 689 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms