RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 MCUQ8NE86 351 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 PIP4K2CQ8TBX8 421 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 CERS2Q96G23 380 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 ZNF408Q9H9D4 720 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 IARS2Q9NSE4 1012 aaKnown RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 C20orf96Q9NUD7 363 aaPredicted RBP14.4□□□□□ -0.1
COL6A1-207ENST00000612273 CLIC5Q9NZA1 410 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 NUP205Q92621 2012 aa14.4□□□□□ -0.1
COL6A1-207ENST00000612273 MDM4O15151 490 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 GAS2O43903 313 aaKnown RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 RECQL4O94761 1208 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 POLBP06746 335 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 BTKQ06187 659 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 TUBB3Q13509 450 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 DPYSL2Q16555 572 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 FSTL4Q6MZW2 842 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 PAOXQ6QHF9 649 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 KYAT3Q6YP21 454 aaKnown RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 SNX32Q86XE0 403 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 RNF135Q8IUD6 432 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 CATSPER2Q96P56 530 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 QKIQ96PU8 341 aaKnown RBP eCLIP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 TASP1Q9H6P5 420 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 PHIPQ8WWQ0 1821 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 TRPA1O75762 1119 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 SEMA5AQ13591 1074 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 RPS27LQ71UM5 84 aaKnown RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 ZSCAN18Q8TBC5 510 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 LRRC39Q96DD0 335 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 PCDHGB4Q9UN71 923 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 SSX2IPQ9Y2D8 614 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 PCDHGB5Q9Y5G0 923 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 NELFEP18615 380 aaKnown RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 ITGAXP20702 1163 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 NAGLUP54802 743 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 MAP3K7CLP57077 242 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 LENG1Q96BZ8 264 aaPredicted RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 RTP4Q96DX8 246 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 TMA16Q96EY4 203 aaKnown RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 MPHOSPH6Q99547 160 aaKnown RBP14.39□□□□□ -0.11
COL6A1-207ENST00000612273 SIK2Q9H0K1 926 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 LRRC4Q9HBW1 653 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 GPRC5DQ9NZD1 345 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 APPL1Q9UKG1 709 aa14.39□□□□□ -0.11
COL6A1-207ENST00000612273 TMEM233B4DJY2 109 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 EEF2KO00418 725 aaKnown RBP14.38□□□□□ -0.11
COL6A1-207ENST00000612273 FESP07332 822 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
COL6A1-207ENST00000612273 IYDQ6PHW0 289 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 CDRT15Q96T59 188 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 APBA2Q99767 749 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 FRMD8Q9BZ67 464 aaPredicted RBP14.38□□□□□ -0.11
COL6A1-207ENST00000612273 PIN4Q9Y237 131 aaKnown RBP14.38□□□□□ -0.11
COL6A1-207ENST00000612273 ASB3Q9Y575 518 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 LAMA3Q16787 3333 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 F8W8V4 182 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 CLGNO14967 610 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 BIRC5O15392 142 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 KLHL2O95198 593 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 PRKCGP05129 697 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 SRGAP2BP0DMP2 458 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 MX2P20592 715 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 MAGEA3P43357 314 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 ZNF280DQ6N043 979 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 ARCQ7LC44 396 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 TDRD5Q8NAT2 981 aaKnown RBP14.38□□□□□ -0.11
COL6A1-207ENST00000612273 DCDC2Q9UHG0 476 aa14.38□□□□□ -0.11
COL6A1-207ENST00000612273 ZBTB24O43167 697 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 AHCYL1O43865 530 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 CNMDO75829 334 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 JUNP05412 331 aaKnown RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 C2P06681 752 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 COX4I1P13073 169 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 PGAM1P18669 254 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 AOC1P19801 751 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 TPSB2P20231 275 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 GP5P40197 560 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 DEUP1Q05D60 604 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 BST2Q10589 180 aaKnown RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 GK3PQ14409 553 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 TPSAB1Q15661 275 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 PAN2Q504Q3 1202 aaKnown RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 SATL1Q86VE3 508 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 RNF169Q8NCN4 708 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 VANGL2Q9ULK5 521 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 SOX11P35716 441 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 ITGA7Q13683 1181 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 MTHFD1LQ6UB35 978 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 RNF34Q969K3 372 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 CNBD2Q96M20 576 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 KCNK16Q96T55 309 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 GATA5Q9BWX5 397 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 PIGVQ9NUD9 493 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 MGAMO43451 1857 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 hCG_2014768A0A024R1R8 64 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 PEX1O43933 1283 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 SNUPNO95149 360 aaKnown RBP14.37□□□□□ -0.11
COL6A1-207ENST00000612273 JCHAINP01591 159 aa14.37□□□□□ -0.11
COL6A1-207ENST00000612273 ERCC2P18074 760 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms