RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 H2AFYO75367 372 aaKnown RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 LGR5O75473 907 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 GCATO75600 419 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 CHEK2O96017 543 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 GFAPP14136 432 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 NPY2RP49146 381 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 NAGLUP54802 743 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 GEMP55040 296 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 NSUN2Q08J23 767 aaKnown RBP eCLIP8.88□□□□□ -0.99
LIG4-204ENST00000611712 KCNJ11Q14654 390 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 MFSD10Q14728 455 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PPM1JQ5JR12 505 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 IL31Q6EBC2 164 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 BNC2Q6ZN30 1099 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 NET1Q7Z628 596 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 CATSPER1Q8NEC5 780 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PDCD6IPQ8WUM4 868 aaKnown RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 ZBED3Q96IU2 234 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 FAXDC2Q96IV6 333 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PIWIL1Q96J94 861 aaKnown RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 CATSPER2Q96P56 530 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 GAD1Q99259 594 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 ANLNQ9NQW6 1124 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 SNX15Q9NRS6 342 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 RBM22Q9NW64 420 aaKnown RBP eCLIP8.88□□□□□ -0.99
LIG4-204ENST00000611712 OR12D3Q9UGF7 316 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PACSIN3Q9UKS6 424 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 SMIM28A0A1B0GU29 152 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 FZD9O00144 591 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PEX11AO75192 247 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 DDHD2O94830 711 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 AXLP30530 894 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PTPN9P43378 593 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 GSCP56915 257 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 ESRRGP62508 458 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 MRPS5P82675 430 aaKnown RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 USP4Q13107 963 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 MOGSQ13724 837 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 CSHL1Q14406 222 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 ZNF235Q14590 738 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 PRKD1Q15139 912 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 IQSEC1Q6DN90 963 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 SNX32Q86XE0 403 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 TMEM130Q8N3G9 435 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 MPP5Q8N3R9 675 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 KYQ8NBH2 561 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 URGCPQ8TCY9 931 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 CALML6Q8TD86 181 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 USP13Q92995 863 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 L3MBTL3Q96JM7 780 aaPredicted RBP8.88□□□□□ -0.99
LIG4-204ENST00000611712 QKIQ96PU8 341 aaKnown RBP eCLIP8.88□□□□□ -0.99
LIG4-204ENST00000611712 TINF2Q9BSI4 451 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 KLHL4Q9C0H6 718 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 TXNRD2Q9NNW7 524 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 DTLQ9NZJ0 730 aa8.88□□□□□ -0.99
LIG4-204ENST00000611712 NRCAMQ92823 1304 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 RNF103-CHMP3A0A140T963 221 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 TRPC5OSA6NMA1 111 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 CLGNO14967 610 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 PIGNO95427 931 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 SMIM10L2AP0DMW4 78 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 SMIM10L2BP0DMW5 78 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ODC1P11926 461 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ANPEPP15144 967 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 NFKB1P19838 968 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 LMO2P25791 158 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ETFBP38117 255 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 HDAC4P56524 1084 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 LRRC8BQ6P9F7 803 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 TLK2Q86UE8 772 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 FAM228AQ86W67 206 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 GSTCDQ8NEC7 633 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 SH3GL3Q99963 347 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 SPON1Q9HCB6 807 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ARHGEF4Q9NR80 690 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 NCKIPSDQ9NZQ3 722 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 CPA4Q9UI42 421 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 SUPT7LO94864 414 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 UPP2O95045 317 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 MT-CO1P00395 513 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 OAS1P00973 400 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 PRKAA1Q13131 559 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 UNC5BQ8IZJ1 945 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 OLIG1Q8TAK6 271 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 PPP2R3CQ969Q6 453 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 UBE2OQ9C0C9 1292 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 TSPYL2Q9H2G4 693 aaPredicted RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 CAB39LQ9H9S4 337 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 SUN2Q9UH99 717 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 AURKCQ9UQB9 309 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 IGKV6D-21A0A0A0MT36 114 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 PPEF2O14830 753 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 XPO1O14980 1071 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 MLNP12872 115 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ATP6V1B1P15313 513 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 RAG1P15918 1043 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 L1CAMP32004 1257 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms