RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 NDUFA8P51970 172 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 RPL11P62913 178 aaKnown RBP8.21□□□□□ -1.1
FAM228B-205ENST00000611127 STK4Q13043 487 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 PSMD6Q15008 389 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 TEAD2Q15562 447 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 TESK1Q15569 626 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 C2orf27AQ580R0 203 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 ZFYVE27Q5T4F4 411 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 LMBRD2Q68DH5 695 aaPredicted RBP8.21□□□□□ -1.1
FAM228B-205ENST00000611127 TRAPPC11Q7Z392 1133 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 TMC8Q8IU68 726 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 CCDC105Q8IYK2 499 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 ADGRF2Q8IZF7 708 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 Q8N1Y9 231 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 SYT8Q8NBV8 401 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 OR5B17Q8NGF7 314 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 FRS2Q8WU20 508 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 ATOH1Q92858 354 aaPredicted RBP8.21□□□□□ -1.1
FAM228B-205ENST00000611127 CCDC47Q96A33 483 aaKnown RBP8.21□□□□□ -1.1
FAM228B-205ENST00000611127 CCDC127Q96BQ5 260 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 CCDC34Q96HJ3 373 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 ZSWIM3Q96MP5 696 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 CDC6Q99741 560 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 TRMT61BQ9BVS5 477 aaKnown RBP8.21□□□□□ -1.1
FAM228B-205ENST00000611127 SPATA9Q9BWV2 254 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 PLA2G2FQ9BZM2 168 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 SLITRK6Q9H5Y7 841 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 DDX43Q9NXZ2 648 aaKnown RBP8.21□□□□□ -1.1
FAM228B-205ENST00000611127 MARCH2Q9P0N8 246 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 NTMQ9P121 344 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 CNOT11Q9UKZ1 510 aaKnown RBP8.21□□□□□ -1.1
FAM228B-205ENST00000611127 L1RE1Q9UN81 338 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
FAM228B-205ENST00000611127 PLXNA3P51805 1871 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 KANSL1LA0AUZ9 987 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 PDXKO00764 312 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 SOAT2O75908 522 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 RPN1P04843 607 aaKnown RBP8.2□□□□□ -1.1
FAM228B-205ENST00000611127 FCARP24071 287 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 GABRR2P28476 465 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 CDC25CP30307 473 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 MC3RP41968 323 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 MRE11P49959 708 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 AP3M2P53677 418 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 RPL10AP62906 217 aaKnown RBP8.2□□□□□ -1.1
FAM228B-205ENST00000611127 NUCB2P80303 420 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 CYP24A1Q07973 514 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 TRPC3Q13507 836 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 MLF2Q15773 248 aaPredicted RBP8.2□□□□□ -1.1
FAM228B-205ENST00000611127 SOWAHAQ2M3V2 549 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 ARHGAP15Q53QZ3 475 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 ACBD5Q5T8D3 534 aaPredicted RBP8.2□□□□□ -1.1
FAM228B-205ENST00000611127 MBLAC2Q68D91 279 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 LIMS2Q7Z4I7 341 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 ZNF227Q86WZ6 799 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 MFSD6LQ8IWD5 586 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 TTC9BQ8N6N2 239 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 KIAA0895Q8NCT3 520 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 DEPDC1BQ8WUY9 529 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 DNASE1L2Q92874 299 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 CHAMP1Q96JM3 812 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 GCNAQ96QF7 691 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 NELL2Q99435 816 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 CGRRF1Q99675 332 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 PI4K2AQ9BTU6 479 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 DDX23Q9BUQ8 820 aaKnown RBP8.2□□□□□ -1.1
FAM228B-205ENST00000611127 OSBPL6Q9BZF3 934 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 BRD9Q9H8M2 597 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 TRPV5Q9NQA5 729 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 GTF3C4Q9UKN8 822 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 PTPRJQ12913 1337 aa8.2□□□□□ -1.1
FAM228B-205ENST00000611127 NCOR1O75376 2440 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 CCDC163A0A0D9SF12 145 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 GOLGA6L4A6NEF3 574 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 C22orf46C9J442 243 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 MAN2B1O00754 1011 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ZNF263O14978 683 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 NCAM2O15394 837 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 CALUO43852 315 aaPredicted RBP8.19□□□□□ -1.1
FAM228B-205ENST00000611127 TACC1O75410 805 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 RHOBTB3O94955 611 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ZNF202O95125 648 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ITGAVP06756 1048 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ATF6P18850 670 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 HSD3B2P26439 372 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ATICP31939 592 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 VIPR2P41587 438 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 MAPRE1Q15691 268 aaKnown RBP8.19□□□□□ -1.1
FAM228B-205ENST00000611127 WDR72Q3MJ13 1102 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 CFAP221Q4G0U5 840 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 GPR158Q5T848 1215 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 FAM171BQ6P995 826 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 VITQ6UXI7 678 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ZNF852Q6ZMS4 543 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ETV3LQ6ZN32 361 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 KRBA2Q6ZNG9 492 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 C4orf50Q6ZRC1 276 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 GAREM2Q75VX8 874 aa8.19□□□□□ -1.1
FAM228B-205ENST00000611127 ZC3H18Q86VM9 953 aaKnown RBP8.19□□□□□ -1.1
FAM228B-205ENST00000611127 JAZF1Q86VZ6 243 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms