RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 RASIP1Q5U651 963 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 C16orf46Q6P387 395 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 TTC27Q6P3X3 843 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PYROXD2Q8N2H3 581 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 FIBCD1Q8N539 461 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 EIF1ADQ8N9N8 165 aaKnown RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 ART4Q93070 314 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 P2RY11Q96G91 374 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SPATA17Q96L03 361 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 CSPG4P5Q96PW8 444 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 FAM167BQ9BTA0 163 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 PKD2L2Q9NZM6 624 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 STOML1Q9UBI4 398 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 UXTQ9UBK9 157 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-218ENST00000610726 MORF4L1Q9UBU8 362 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 DNMT3LQ9UJW3 386 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 GABRQQ9UN88 632 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 VPS9D1Q9Y2B5 631 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 STRCP1A6NGW2 1772 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 UBR2Q8IWV8 1755 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 LTBP4Q8N2S1 1624 aa7.44□□□□□ -1.22
CSDE1-218ENST00000610726 A0A1W2PQH9 124 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 VGLL3A8MV65 326 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PHGDHO43175 533 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 F2P00734 622 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 ITGALP20701 1170 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SP100P23497 879 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CYP2C18P33260 490 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CD86P42081 329 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SLC5A3P53794 718 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 AQP5P55064 265 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TIGD5Q53EQ6 642 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 KRT80Q6KB66 452 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 LRRC8EQ6NSJ5 796 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 ZCCHC23Q6ZST2 131 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SLC26A9Q7LBE3 791 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 STRADAQ7RTN6 431 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 LONP2Q86WA8 852 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 RASAL3Q86YV0 1011 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CFAP52Q8N1V2 620 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TBL1YQ9BQ87 522 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 IL1RL2Q9HB29 575 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 KLC4Q9NSK0 619 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SEPT3Q9UH03 358 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CDYLQ9Y232 598 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CRYL1Q9Y2S2 319 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CHUKO15111 745 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CHADO15335 359 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 FGF10O15520 208 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 HCRTO43612 131 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PAGE1O75459 146 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SOAT2O75908 522 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TOMM70O94826 608 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CCND3P30281 292 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CDKN2BP42772 138 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 GPD2P43304 727 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SERPINB4P48594 390 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 NPY2RP49146 381 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 MAP3K10Q02779 954 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 DDX39BQ13838 428 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 ANKRD20A4Q4UJ75 823 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 INTS6LQ5JSJ4 861 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TAPT1Q6NXT6 567 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TAS1R3Q7RTX0 852 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 FNIP1Q8TF40 1166 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 UCMAQ8WVF2 138 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 KLHL5Q96PQ7 755 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 ZYG11BQ9C0D3 744 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 POLR1EQ9GZS1 481 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.43□□□□□ -1.229e-6■■□□□ 13.2
CSDE1-218ENST00000610726 ZCWPW1Q9H0M4 648 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PLK2Q9NYY3 685 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 ADAM28Q9UKQ2 775 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 RNF112Q9ULX5 631 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CCDC88AQ3V6T2 1871 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PLCH1Q4KWH8 1693 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PTPRJQ12913 1337 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 RNF103-CHMP3A0A140T963 221 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 UNCXA6NJT0 531 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 OR6C75A6NL08 312 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TULP2O00295 520 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 ZNF135P52742 658 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PLK1P53350 603 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 HDAC4P56524 1084 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PURAQ00577 322 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SATB1Q01826 763 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 TBCCQ15814 346 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PARP9Q8IXQ6 854 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 CNPY4Q8N129 248 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 LRRC43Q8N309 656 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 PLD5Q8N7P1 536 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SPPL2BQ8TCT7 592 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 B3GALT6Q96L58 329 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 HNRNPABQ99729 332 aaKnown RBP7.43□□□□□ -1.22
CSDE1-218ENST00000610726 SEMA3CQ99985 751 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 WWOXQ9NZC7 414 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 GMIPQ9P107 970 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 YJEFN3A6XGL0 299 aa7.43□□□□□ -1.22
CSDE1-218ENST00000610726 E7ENQ6 273 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms