RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 SCML1Q9UN30 329 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 HS3ST4Q9Y661 456 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 BZW2Q9Y6E2 419 aaKnown RBP11.91□□□□□ -0.5
CCDC12-209ENST00000604164 MYO18AQ92614 2054 aaKnown RBP11.91□□□□□ -0.5
CCDC12-209ENST00000604164 OTOGLQ3ZCN5 2332 aa11.91□□□□□ -0.5
CCDC12-209ENST00000604164 IGHV1OR15-9A0A0B4J2B8 117 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 A0A1W2PQJ5 194 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 TARSL2A2RTX5 802 aaKnown RBP11.9□□□□□ -0.5
CCDC12-209ENST00000604164 C2CD4BA6NLJ0 364 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 LRRC53A6NM62 1247 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 SIGLEC16A6NMB1 481 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 KHNYNO15037 678 aaKnown RBP11.9□□□□□ -0.5
CCDC12-209ENST00000604164 ENDOD1O94919 500 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 ADCY5O95622 1261 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 BCKDHBP21953 392 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 TGM1P22735 817 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 CD6P30203 668 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 KRT83P78385 493 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 ATP11AP98196 1134 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 KLHL30Q0D2K2 578 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 PTPRNQ16849 979 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 TTC31Q49AM3 519 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-209ENST00000604164 C2CD6Q53TS8 623 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 FSCBQ5H9T9 825 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 PLA2G2CQ5R387 149 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 MON1BQ7L1V2 547 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 BNIPLQ7Z465 357 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 IRF2BP2Q7Z5L9 587 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 SETD3Q86TU7 594 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-209ENST00000604164 VPS36Q86VN1 386 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 SYT12Q8IV01 421 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 CEP76Q8TAP6 659 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 RXFP2Q8WXD0 754 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 TRIM11Q96F44 468 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 NAP1L5Q96NT1 182 aaPredicted RBP11.9□□□□□ -0.5
CCDC12-209ENST00000604164 PCDHB18PQ96TA0 734 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 MKRN2Q9H000 416 aaKnown RBP11.9□□□□□ -0.5
CCDC12-209ENST00000604164 PCED1AQ9H1Q7 454 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 PARD6AQ9NPB6 346 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 ITM2CQ9NQX7 267 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 USP36Q9P275 1121 aaKnown RBP11.9□□□□□ -0.5
CCDC12-209ENST00000604164 SLC25A13Q9UJS0 675 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 CYP8B1Q9UNU6 501 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 ERVW-1Q9UQF0 538 aa11.9□□□□□ -0.5
CCDC12-209ENST00000604164 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 EDDM13A0A1B0GTR0 161 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 CBFA2T2O43439 604 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 IGLV3-19P01714 112 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 DNTTP04053 509 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 C7P10643 843 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 GZMAP12544 262 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 TFE3P19532 575 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 GPD1P21695 349 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 ETFBP38117 255 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 PRKCIP41743 596 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 VASPP50552 380 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 LIMK1P53667 647 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 PTP4A2Q12974 167 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 HNRNPA1L2Q32P51 320 aaKnown RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 WDR45BQ5MNZ6 344 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 C6orf118Q5T5N4 469 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 OTUD1Q5VV17 481 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF776Q68DI1 518 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 DCUN1D2Q6PH85 259 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 ZNF783Q6ZMS7 281 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 ERMP1Q7Z2K6 904 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 TMEFF1Q8IYR6 380 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 EMC1Q8N766 993 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 CADM4Q8NFZ8 388 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 PIGKQ92643 395 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 SYN2Q92777 582 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 IGSF8Q969P0 613 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 MYEOVQ96EZ4 313 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 RTKNQ9BST9 563 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 C2orf49Q9BVC5 232 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 MUC3BQ9H195 1237 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 PRSS16Q9NQE7 514 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 PARVAQ9NVD7 372 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 SUSD2Q9UGT4 822 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 EVLQ9UI08 416 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 MBD1Q9UIS9 605 aaPredicted RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 VPS28Q9UK41 221 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 INTS6Q9UL03 887 aaKnown RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 NCKAP1Q9Y2A7 1128 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 TBC1D30Q9Y2I9 924 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.89□□□□□ -0.512e-11■■■■■ 33.6
CCDC12-209ENST00000604164 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.89□□□□□ -0.51
CCDC12-209ENST00000604164 USP34Q70CQ2 3546 aa11.89□□□□□ -0.51
CCDC12-209ENST00000604164 SPAG17Q6Q759 2223 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 ITIH6Q6UXX5 1313 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
CCDC12-209ENST00000604164 IGLV3-10A0A075B6K4 115 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 DRGXA6NNA5 263 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 E9PAM4 449 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 RHOCP08134 193 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 MYBL1P10243 752 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 HLA-EP13747 358 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 GNSP15586 552 aa11.88□□□□□ -0.51
CCDC12-209ENST00000604164 OR1E1P30953 314 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms