RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 EGFLAMQ63HQ2 1017 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 ZC3H14Q6PJT7 736 aaKnown RBP16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 KIAA0907Q7Z7F0 614 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 RHOT2Q8IXI1 618 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 CAMKK1Q8N5S9 505 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 WFDC5Q8TCV5 224 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 ATOH1Q92858 354 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 TBC1D31Q96DN5 1066 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 BAG1Q99933 345 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 PACSIN1Q9BY11 444 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 TRIM7Q9C029 511 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 THAP10Q9P2Z0 257 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 PCSK1NQ9UHG2 260 aa16.49■□□□□ 0.23
PPFIA3-213ENST00000602905 EIF3CLB5ME19 914 aaKnown RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 APBB3O95704 486 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 SP9P0CG40 484 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 HOXB2P14652 356 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 MIPP30301 263 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 OR1E1P30953 314 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 L1CAMP32004 1257 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 SSR1P43307 286 aaKnown RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 DGKEP52429 567 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 ST8SIA6P61647 398 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 SULT2A1Q06520 285 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 ZNF252P-AS1Q0IIN9 211 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 TCF15Q12870 199 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 STARD3Q14849 445 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 CRY1Q16526 586 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 HADHQ16836 314 aaKnown RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 FNDC3BQ53EP0 1204 aaKnown RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 FSCBQ5H9T9 825 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 PITRM1Q5JRX3 1037 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 RNF219Q5W0B1 726 aaPredicted RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 TSSK4Q6SA08 328 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 SETD3Q86TU7 594 aaPredicted RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 PSTKQ8IV42 348 aaKnown RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 ZNF683Q8IZ20 524 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 NIPA2Q8N8Q9 360 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 TSTD1Q8NFU3 115 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 EIF3CQ99613 913 aaKnown RBP16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 MUC3BQ9H195 1237 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 CATSPERBQ9H7T0 1116 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 GRPEL1Q9HAV7 217 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 DONSONQ9NYP3 566 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 MPP6Q9NZW5 540 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 USP18Q9UMW8 372 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 AP4E1Q9UPM8 1137 aa16.48■□□□□ 0.23
PPFIA3-213ENST00000602905 SGK1O00141 431 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 CREB3O43889 395 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 SYNCRIPO60506 623 aaKnown RBP16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 LRCH4O75427 683 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 CNTN5O94779 1100 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 LRIG2O94898 1065 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 DLDP09622 509 aaKnown RBP16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 RHOQP17081 205 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 FECHP22830 423 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 HTR7P34969 479 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 NNMTP40261 264 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 CSKP41240 450 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 WASP42768 502 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 ZNF234Q14588 700 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 PLEKHG6Q3KR16 790 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 FUT11Q495W5 492 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 BOLA3Q53S33 107 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 ALFQ53S48 1182 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 SERPINA13PQ6UXR4 307 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 TFAP2DQ7Z6R9 452 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 ADIPOR2Q86V24 386 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 MAML2Q8IZL2 1156 aaPredicted RBP16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 SLC35G2Q8TBE7 412 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 ATRIPQ8WXE1 791 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 SORCS1Q8WY21 1168 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 TTC17Q96AE7 1141 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 BTBD6Q96KE9 485 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 HHIPQ96QV1 700 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 ZDHHC4Q9NPG8 344 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 ZSCAN32Q9NX65 697 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 CACNA2D2Q9NY47 1150 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 VPS28Q9UK41 221 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 TBC1D30Q9Y2I9 924 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 EPN1Q9Y6I3 576 aaPredicted RBP16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 STON1Q9Y6Q2 735 aa16.47■□□□□ 0.23
PPFIA3-213ENST00000602905 MUC6Q6W4X9 2439 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 ANTXRLA6NF34 631 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 SOWAHDA6NJG2 315 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 K7ESF4 209 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 NDUFA10O95299 355 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 LCA5LO95447 670 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 SRPRAP08240 638 aaKnown RBP16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 EPHB2P29323 1055 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 HOXA6P31267 233 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 ETFBP38117 255 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 MAPKAPK2P49137 400 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 IRAK1P51617 712 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 ZNF135P52742 658 aaPredicted RBP16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 PLK1P53350 603 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 TPI1P60174 286 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 KRT83P78385 493 aa16.46■□□□□ 0.23
PPFIA3-213ENST00000602905 TMEM215Q68D42 235 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms