RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ERVW-1Q9UQF0 538 aa21.93■■□□□ 1.1
PPFIA3-209ENST00000602783 SNX11Q9Y5W9 270 aa21.93■■□□□ 1.1
PPFIA3-209ENST00000602783 NYNRINQ9P2P1 1898 aaKnown RBP21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 RNASEH1O60930 286 aaKnown RBP21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 MOCS3O95396 460 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 PNMA6AP0CW24 399 aaPredicted RBP21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 TACR2P21452 398 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 CTSOP43234 321 aaPredicted RBP21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 VWA3BQ502W6 1294 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 CHSY1Q86X52 802 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 ADAMTS14Q8WXS8 1223 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 TUBGCP2Q9BSJ2 902 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 PABPC3Q9H361 631 aaKnown RBP21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 OSGEPQ9NPF4 335 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 FBXL12Q9NXK8 326 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 KIAA1522Q9P206 1035 aaPredicted RBP21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 SCML1Q9UN30 329 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 APOBEC2Q9Y235 224 aaKnown RBP21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 ANKRD6Q9Y2G4 727 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 CEP83Q9Y592 693 aa21.92■■□□□ 1.1
PPFIA3-209ENST00000602783 FAM47DPA6NHR8 397 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 SRRM3A6NNA2 597 aaPredicted RBP21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 TTC34A8MYJ7 566 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 CD27P26842 260 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 PITX1P78337 314 aaPredicted RBP21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 TAF5Q15542 800 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 C9orf64Q5T6V5 341 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 DBX2Q6ZNG2 339 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 USP30Q70CQ3 517 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 GLRX5Q86SX6 157 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 SLCO6A1Q86UG4 719 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 KDM1BQ8NB78 822 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 RHBDD1Q8TEB9 315 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 BTN2A3PQ96KV6 586 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 SLCO3A1Q9UIG8 710 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 PCDHGC3Q9UN70 934 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 PCDHGB2Q9Y5G2 931 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 ZZEF1O43149 2961 aa21.91■■□□□ 1.1
PPFIA3-209ENST00000602783 SPEGQ15772 3267 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 PES1O00541 588 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 KCNK3O14649 394 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 SRPRAP08240 638 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 GRIA4P48058 902 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 ECT2LQ008S8 904 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 PTK2Q05397 1052 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 SFSWAPQ12872 951 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 KCNJ12Q14500 433 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 SUZ12Q15022 739 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 CST6Q15828 149 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 KIAA0895LQ68EN5 471 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 LAYNQ6UX15 382 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 MMAAQ8IVH4 418 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 APCDD1Q8J025 514 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 WDTC1Q8N5D0 677 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 ATP6V0D2Q8N8Y2 350 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 C1orf131Q8NDD1 294 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 CPXM1Q96SM3 734 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 SAMSN1Q9NSI8 373 aaKnown RBP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 SERGEFQ9UGK8 458 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 SLC12A6Q9UHW9 1150 aa21.9■■□□□ 1.1
PPFIA3-209ENST00000602783 A0A1W2PP55 124 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 TARSL2A2RTX5 802 aaKnown RBP21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 KCNU1A8MYU2 1149 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 F5H5T6 163 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 FOXN3O00409 490 aaPredicted RBP21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 MID1O15344 667 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 FLRT2O43155 660 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 IGLV3-25P01717 112 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 GALCP54803 685 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 ARID5BQ14865 1188 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 RNF219Q5W0B1 726 aaPredicted RBP21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 SMYD5Q6GMV2 418 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 DPY19L2P1Q6NXN4 242 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 ADAT2Q7Z6V5 191 aaKnown RBP21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 SLC47A2Q86VL8 602 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 PPP1R13BQ96KQ4 1090 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 RPL10LQ96L21 214 aaKnown RBP21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 OMDQ99983 421 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 NEUROG2Q9H2A3 272 aa21.89■■□□□ 1.09
PPFIA3-209ENST00000602783 SYNJ2BP-COX16A0A087WUM0 186 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 EDDM13A0A1B0GTR0 161 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 RNASEH2AO75792 299 aaKnown RBP21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 IGHV4-34P06331 123 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 SLC8A1P32418 973 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 CLCN1P35523 988 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 NUMBP49757 651 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 CDK17Q00537 523 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 EIF4EBP2Q13542 120 aaPredicted RBP21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 KCNT1Q5JUK3 1230 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 DEFB106AQ8N104 65 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 BAHD1Q8TBE0 780 aaPredicted RBP21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 RNF34Q969K3 372 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 NOX5Q96PH1 765 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 FAM129BQ96TA1 746 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 CDC6Q99741 560 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 ORAI3Q9BRQ5 295 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 FAM204AQ9H8W3 233 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 COX16Q9P0S2 106 aa21.88■■□□□ 1.09
PPFIA3-209ENST00000602783 FHOD1Q9Y613 1164 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms