RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 BHLHB9Q6PI77 547 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 C8orf59Q8N0T1 100 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TMEM121Q9BTD3 319 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 PRMT7Q9NVM4 692 aaPredicted RBP8.87□□□□□ -0.99
CSMD1-216ENST00000602557 NUDT5Q9UKK9 219 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 TPRKBQ9Y3C4 175 aa8.87□□□□□ -0.99
CSMD1-216ENST00000602557 UMODL1Q5DID0 1318 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 C2orf81A6NN90 581 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 TM9SF1O15321 606 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 DYNC1LI2O43237 492 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 TRIM48Q8IWZ4 208 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 APOL2Q9BQE5 337 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PDCD10Q9BUL8 212 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ABLIM1O14639 778 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 KDM4BO94953 1096 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 EPN2O95208 641 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CCNG1P51959 295 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 TKFCQ3LXA3 575 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ATP6AP1LQ52LC2 224 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 VPS33AQ96AX1 596 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SLC4A9Q96Q91 983 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 RAD18Q9NS91 495 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 LIMD1Q9UGP4 676 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CNOT7Q9UIV1 285 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 MSH4O15457 936 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 BMP10O95393 424 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PCNAP12004 261 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PKN2Q16513 984 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SEZ6Q53EL9 994 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SH3D19Q5HYK7 790 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ABRAXAS1Q6UWZ7 409 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 EFHD2Q96C19 240 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ZHX1-C8orf76Q96EF9 292 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 TMEM138Q9NPI0 162 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 GTF3C4Q9UKN8 822 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 USP18Q9UMW8 372 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PRKAB1Q9Y478 270 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 DLC1Q96QB1 1528 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 IQCMA0A1B0GVH7 501 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 M0QYT0 321 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 MAP3K13O43283 966 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SUPT7LO94864 414 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CAMTA2O94983 1202 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CYP4B1P13584 511 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 FDPSP14324 419 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ADSSP30520 456 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SLC15A2Q16348 729 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 GLB1LQ6UWU2 654 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SYTL5Q8TDW5 730 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 KRCC1Q9NPI7 259 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 THAP1Q9NVV9 213 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CMTM6Q9NX76 183 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ZNRF3Q9ULT6 936 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 WFS1O76024 890 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 STAU1O95793 577 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 OR1G1P47890 313 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CNTN1Q12860 1018 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ERMARDQ5T6L9 678 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ERAP2Q6P179 960 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 EID3Q8N140 333 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 EFR3BQ9Y2G0 817 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PCDHB7Q9Y5E2 793 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 RPA1P27694 616 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 TRAP1Q12931 704 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ITGA9Q13797 1035 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ANGEL2Q5VTE6 544 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 MIB1Q86YT6 1006 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 APOPT1Q96IL0 206 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CCDC115Q96NT0 180 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PARK7Q99497 189 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 GPC6Q9Y625 555 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 TAF6LQ9Y6J9 622 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CHD4Q14839 1912 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 FAM25EA8MYX2 175 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 TSPAN19P0C672 248 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ADRA1DP25100 572 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SNRPFP62306 86 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PAGE2Q7Z2X7 111 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 ACOT1Q86TX2 421 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 MXRA8Q9BRK3 442 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 GPRC5CQ9NQ84 441 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 LOC110117498-PIK3R3F6TDL0 507 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 SLC2A3P11169 496 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 DARSP14868 501 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 PAGE2BQ5JRK9 111 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 DCP1BQ8IZD4 617 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 DPP10Q8N608 796 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 FRMD8Q9BZ67 464 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 GPRC5DQ9NZD1 345 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 CCDC166P0CW27 439 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 HIST2H2ACQ16777 129 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 BOLA3Q53S33 107 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 STRIP1Q5VSL9 837 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 HIST2H2AA3Q6FI13 130 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 UGT3A1Q6NUS8 523 aa8.86□□□□□ -0.99
CSMD1-216ENST00000602557 GFM1Q96RP9 751 aaKnown RBP8.86□□□□□ -0.99
CSMD1-216ENST00000602557 GLRA3O75311 464 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 RAB43Q86YS6 212 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 WDCPQ9H6R7 721 aa8.85□□□□□ -0.99
CSMD1-216ENST00000602557 AFF2P51816 1311 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms