RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	BNIP3	Q12983	259 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	NNT	Q13423	1086 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	EDRF1	Q3B7T1	1238 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	MFN1	Q8IWA4	741 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	MFSD2A	Q8NA29	543 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	HJURP	Q8NCD3	748 aa	Predicted RBP	18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	SLC35F5	Q8WV83	523 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	PTPRN2	Q92932	1015 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	EEF2KMT	Q96G04	330 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	SLC39A13	Q96H72	371 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	ERVW-1	Q9UQF0	538 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	SSUH2	Q9Y2M2	353 aa		18.97	■□□□□ 0.63
IRF3-231	ENST00000602190	RNASEH1	O60930	286 aa	Known RBP	18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	F13A1	P00488	732 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	C5AR1	P21730	350 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	RPL13	P26373	211 aa	Known RBP	18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	PPP2CB	P62714	309 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	PPP2CA	P67775	309 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	OVGP1	Q12889	678 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	SGO2	Q562F6	1265 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	FSCB	Q5H9T9	825 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	NAPEPLD	Q6IQ20	393 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	MMAA	Q8IVH4	418 aa	Known RBP	18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	DHX40	Q8IX18	779 aa	Known RBP	18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	SPACA3	Q8IXA5	215 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	HIC2	Q96JB3	615 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	FCRL2	Q96LA5	508 aa	Predicted RBP	18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	IPO9	Q96P70	1041 aa	Known RBP	18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	KDM4C	Q9H3R0	1056 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	AK5	Q9Y6K8	562 aa		18.96	■□□□□ 0.63
IRF3-231	ENST00000602190	EDDM13	A0A1B0GTR0	161 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	FAM47DP	A6NHR8	397 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	TTC34	A8MYJ7	566 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	LZTS3	O60299	673 aa	Predicted RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	RNASEH2A	O75792	299 aa	Known RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	DXO	O77932	396 aa	Known RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	FYN	P06241	537 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	ZSCAN22	P10073	491 aa	Predicted RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	VDR	P11473	427 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	PFKFB1	P16118	471 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	NUDT1	P36639	197 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	RPL34	P49207	117 aa	Known RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	SLC11A2	P49281	568 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	VASP	P50552	380 aa	Predicted RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	ST8SIA6	P61647	398 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	RPS24	P62847	133 aa	Known RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	ADAM9	Q13443	819 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	CUL2	Q13617	745 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	PITRM1	Q5JRX3	1037 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	LCLAT1	Q6UWP7	414 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	SND1	Q7KZF4	910 aa	Known RBP eCLIP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	SNRNP27	Q8WVK2	155 aa	Known RBP	18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	SERAC1	Q96JX3	654 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	AASDHPPT	Q9NRN7	309 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	FOXD4L1	Q9NU39	408 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	NAV2	Q8IVL1	2488 aa		18.95	■□□□□ 0.62
IRF3-231	ENST00000602190	ERVH48-1	M5A8F1	160 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	ADH1B	P00325	375 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CMA1	P23946	247 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	ACTN2	P35609	894 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CTSO	P43234	321 aa	Predicted RBP	18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	DPYD	Q12882	1025 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	ELAVL3	Q14576	367 aa	Known RBP	18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CBWD6	Q4V339	395 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	MS4A13	Q5J8X5	152 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CBWD3	Q5JTY5	395 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CBWD5	Q5RIA9	395 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CDCP2	Q5VXM1	449 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	ZNF605	Q86T29	641 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	SIX6OS1	Q8N1H7	587 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	ZSWIM1	Q9BR11	485 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	MMRN2	Q9H8L6	949 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	HESX1	Q9UBX0	185 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	SLCO3A1	Q9UIG8	710 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	KIAA1257	Q9ULG3	409 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CLCA2	Q9UQC9	943 aa		18.94	■□□□□ 0.62
IRF3-231	ENST00000602190	CAPN8	A6NHC0	703 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	CAPN9	O14815	690 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	SLC7A4	O43246	635 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	LUC7L3	O95232	432 aa	Known RBP	18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	LTF	P02788	710 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	PRR29	P0C7W0	189 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	GLDC	P23378	1020 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	MZF1	P28698	734 aa	Predicted RBP	18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	TBX4	P57082	545 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	CFHR1	Q03591	330 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	EIF4EBP2	Q13542	120 aa	Predicted RBP	18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	SLC45A4	Q5BKX6	768 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	PMF1	Q6P1K2	205 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	MMS22L	Q6ZRQ5	1243 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	TRIM69	Q86WT6	500 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	UBA3	Q8TBC4	463 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	GANC	Q8TET4	914 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	FRS2	Q8WU20	508 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	TFAP2B	Q92481	460 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	OMD	Q99983	421 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	NUCKS1	Q9H1E3	243 aa	Known RBP	18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	CYTH4	Q9UIA0	394 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	DMTF1	Q9Y222	760 aa		18.93	■□□□□ 0.62
IRF3-231	ENST00000602190	TLR6	Q9Y2C9	796 aa		18.93	■□□□□ 0.62

Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms